Table 3. Comparison of sex calls derived from STR profiling, the SNPtrace Panel, Illumina SNP arrays and SKY.

Call (based on SNP array)	Cell Line Name	CLID	Sex calls
			Annotated	STR	SNPTrace	illumina	SKY Karyotype
Female typed as Female	LXFL529	130847	Female	Female	Female	Female	XX
	NCI-H1993	129701	Female	Female	Female	Female	XXXXXX
	NCI-H2009	131971	Female	Female	Male	Female	X
	NCI-H2073	129695	Female	Female	No Call	Female	XXX
	NCI-H2122	130148	Female	Female	Female	Female	XX
	NCI-H292	129184	Female	Female	No Call	Female	XX
Male typed as Female	NCI-H1155	131718	Male	Female	No Call	Female	XX
	NCI-H1299	129461	Male	Female	No Call	Female	XXXX
	NCI-H23	129190	Male	Female	Female	Female	XX
	NCI-H322T	585717	Male	Female	Female	Female	XX
	NCI-H441	130150	Male	Male	Male	Female	XX
	NCI-H522	129185	Male	Female	Female	Female	XX
	NCI-H838	129191	Male	Female	Female	Female	X
Male typed as Male	A549	130497	Male	Male	Male	Male	XXY
	NCI-H1703	130536	Male	Male	Male	Male	XY
	NCI-H226	129544	Male	Male	Male	Male	XYY
	NCI-H358	129179	Male	Male	Male	Male	XXY
	NCI-H460	129455	Male	Male	Male	Male	XXYY
	NCI-H650	129187	Male	Female	Female	Male	XXX