Γi=G1,G2
|
cyclin transition functions |
n/a |
ΓE,i
|
cyclin E1 transition function on sub-interval i |
n/a |
ΓB,k
|
cyclin B1 transition function on sub-interval k |
n/a |
ΓS
|
DNA transition function |
n/a |
μ |
cell growth rate |
h-1
|
cycE
|
cyclin E1 distributed content |
% cyclin |
cycEmax
|
maximum cyclin E1 content used for domain truncation |
% cyclin |
cycB
|
cyclin B1 distributed content |
% cyclin |
cycBmax
|
maximum cyclin B1 content used for domain truncation |
% cyclin |
cycBmin
|
minimum cyclin B1 content used for the domain start |
% cyclin |
DNA
|
DNA distributed content |
DNA relative content |
fi = G1,S,G2M
|
cell fraction in phase i |
n/a |
flim
|
Monod kinetics functions |
n/a |
Glc
|
extracellular glucose concentration |
mM |
Glu
|
extracellular glutamate concentration |
mM |
hi = E,DNA,B
|
resolution of a sub-interval (bin) |
% cyclin or DNA relative content |
Lac
|
extracellular lactate concentration |
mM |
mAb
|
antibody concentration |
mg/L |
Ni = G1,S,G2
|
number of cells distributed on a variable for each phase |
Cells |
NE,i
|
number of cells on sub-interval i of domain cyclin E1 |
Cells |
NDNA,j
|
number of cells on sub-interval j of domain DNA |
Cells |
NB,k
|
number of cells on sub-interval k of domain cyclin B1 |
Cells |
ni = E,DNA,B
|
number of sub-intervals (or bins) within each domain interval |
n/a |
Qi = Glu,Glc
|
substrate consumption rate |
mM/cells/h |
ri
|
growth functions of the distributed variable |
h-1
|
rE,i
|
cyclin E1 growth function on sub-interval i |
% cyc E/h |
rDNA,j
|
DNA growth function on sub-interval j |
DNA/h |
rB,k
|
cyclin B1 growth function on sub-interval k |
% cyc B/h |
total
|
total number of viable cells |
cells |
phasei = G1,S,G2
|
number of cells in phase i |
cells |
(s)
|
substrate/metabolite concentration |
mM |
V
|
Volume |
mL |
XV
|
viable cell density |
cells/mL |
XD
|
death cell density |
cells/mL |