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. 2004 Jun 1;32(10):3028–3032. doi: 10.1093/nar/gkh640

Figure 1.

Figure 1

(A) Cleavage and modification pattern of the 172mer by RNase T1 (green), RNase T2 (blue), kethoxal (red) and DMS (brown) shown on the phylogenetic secondary structure. (B) The cleavage/modification pattern shown on our proposed secondary structure. Rearranged residues are shown in magenta. (C) Footprinting of DbpA on the 172mer: apo-DbpA protection (triangles), AMPPNP-dependent DbpA protection (stars) and hypersensitivity (pentagons). Lower case denotes regions for which no data were collected.