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. 2014 Dec 22;95(3):250–262. doi: 10.1038/labinvest.2014.163

Table 1. Inflammatory genes expressed in podocytes exposed to rSAA.

Discovery data sets
Validation data sets
Gene symbol Gene name and/or description P-value RT2 Profiler Array RT2 Profiler Array experiments, independent primers Subsequent experiments
C3 Complement component 3 <0.001 24.4 25.4  
Ccl2 MCP-1, monocyte chemoattractant protein-1, chemokine CC motif 2 <0.001 18.2 17.9 6.4
Ccl5 RANTES, regulated on activation, normal T-cell expressed and secreted, chemokine CC motif 5 <0.001 36.6 25.21 101.0
Ccl7 MCP-3, monocyte chemotactic protein-3, chemokine CC motif 7 <0.001 16.8 17.6  
Ccl8 MCP-2, monocyte chemotactic protein-2, chemokine CC motif 8 0.002 22.6 21.0  
Ccl17 TARC, thymus and activation-regulated chemokine CC motif 17 <0.001 3.4    
Ccl19 MIP-3, macrophage inflammatory protein-3-beta, chemokine CC motif 19 0.013 −5.6    
Ccl20 MIP-3, macrophage inflammatory protein-3-alpha, chemokine CC motif 20 <0.001 37.6    
Cxcl1 GRO1, growth-related oncogene alpha chemokine CXC motif 1 <0.001 30.0 25.7  
Cxcl2 GRO2, growth-related oncogene beta chemokine CXC motif 2 <0.001 28.3 16.0  
Cxcl3 GRO3, growth-related oncogene gamma chemokine CXC motif 3 <0.001 8.5    
Cxcl5 ENA-78, epithelial-derived neutrophil-activating protein 78, chemokine CXC motif 5 <0.001 166.1 52.5 18.5
Cxcl11 I-TAC, interferon-inducible T-cell alpha chemoattractant, chemokine CXC motif 11 0.003 3.6    
Csf2 G-CSF2, granulocyte colony stimulating factor 2 <0.001 72.2    
Csf3 G-CSF3, granulocyte colony stimulating factor 3 <0.001 34.2    
Il1a Interleukin-1 0.018 3.0    
Il1rn IL-1ra, interleukin-1 receptor antagonist <0.001 5.3    
Il-6 Interleukin 6 0.007 27.2    
Itgb2 Cd18, integrin beta 2 <0.001 3.6    
Kng1 Kng, kininogen1 0.003 10.0    
Nos2 iNOS, nitric oxide synthase 2 <0.001 19.9 56.8 18.9
Ptgs2 Cox-2, prostaglandin-endoperoxide synthase 2 <0.001 3.3    
Tlr5 Toll-like receptor 5 0.006 −7.4    

Data are represented as fold change vs control.