Table 1. Inflammatory genes expressed in podocytes exposed to rSAA.
Discovery data sets |
Validation data sets |
||||
---|---|---|---|---|---|
Gene symbol | Gene name and/or description | P-value | RT2 Profiler Array | RT2 Profiler Array experiments, independent primers | Subsequent experiments |
C3 | Complement component 3 | <0.001 | 24.4 | 25.4 | |
Ccl2 | MCP-1, monocyte chemoattractant protein-1, chemokine CC motif 2 | <0.001 | 18.2 | 17.9 | 6.4 |
Ccl5 | RANTES, regulated on activation, normal T-cell expressed and secreted, chemokine CC motif 5 | <0.001 | 36.6 | 25.21 | 101.0 |
Ccl7 | MCP-3, monocyte chemotactic protein-3, chemokine CC motif 7 | <0.001 | 16.8 | 17.6 | |
Ccl8 | MCP-2, monocyte chemotactic protein-2, chemokine CC motif 8 | 0.002 | 22.6 | 21.0 | |
Ccl17 | TARC, thymus and activation-regulated chemokine CC motif 17 | <0.001 | 3.4 | ||
Ccl19 | MIP-3, macrophage inflammatory protein-3-beta, chemokine CC motif 19 | 0.013 | −5.6 | ||
Ccl20 | MIP-3, macrophage inflammatory protein-3-alpha, chemokine CC motif 20 | <0.001 | 37.6 | ||
Cxcl1 | GRO1, growth-related oncogene alpha chemokine CXC motif 1 | <0.001 | 30.0 | 25.7 | |
Cxcl2 | GRO2, growth-related oncogene beta chemokine CXC motif 2 | <0.001 | 28.3 | 16.0 | |
Cxcl3 | GRO3, growth-related oncogene gamma chemokine CXC motif 3 | <0.001 | 8.5 | ||
Cxcl5 | ENA-78, epithelial-derived neutrophil-activating protein 78, chemokine CXC motif 5 | <0.001 | 166.1 | 52.5 | 18.5 |
Cxcl11 | I-TAC, interferon-inducible T-cell alpha chemoattractant, chemokine CXC motif 11 | 0.003 | 3.6 | ||
Csf2 | G-CSF2, granulocyte colony stimulating factor 2 | <0.001 | 72.2 | ||
Csf3 | G-CSF3, granulocyte colony stimulating factor 3 | <0.001 | 34.2 | ||
Il1a | Interleukin-1 | 0.018 | 3.0 | ||
Il1rn | IL-1ra, interleukin-1 receptor antagonist | <0.001 | 5.3 | ||
Il-6 | Interleukin 6 | 0.007 | 27.2 | ||
Itgb2 | Cd18, integrin beta 2 | <0.001 | 3.6 | ||
Kng1 | Kng, kininogen1 | 0.003 | 10.0 | ||
Nos2 | iNOS, nitric oxide synthase 2 | <0.001 | 19.9 | 56.8 | 18.9 |
Ptgs2 | Cox-2, prostaglandin-endoperoxide synthase 2 | <0.001 | 3.3 | ||
Tlr5 | Toll-like receptor 5 | 0.006 | −7.4 |
Data are represented as fold change vs control.