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. 2015 Feb 16;16(2):4209–4225. doi: 10.3390/ijms16024209

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© 2015 by the authors; licensee MDPI, Basel, Switzerland.

This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/).

PMC Copyright notice

Analysis of p-sites by sequence motif, Group-based Prediction System (GPS) algorithm with the interaction filter, or in vivo GPS (iGPS), the distribution of amino acid flanking and structural preferences in the MHCC97-H cell line. (A) The sequence motif analysis of p-sites in the MHCC97-H cell line consisting of 14 residues surrounding the targeted site by Motif-X; (B) The top 10 protein kinases with the most p-sites by the prediction of iGPS; (C) The heatmap for the distribution of amino acids flanking p-sites in the MHCC97-H phosphoproteome; (D) The secondary structural distribution for the p-sites.