Skip to main content
. 2014 Jul 22;13:105. doi: 10.1186/s12934-014-0105-4

Table 4.

Results of analysis of DNA sequence of the insert in clone 129–3

ORF position in the clone Putative gene Significant similarity (%) to known gene from indicated organism Description
1885-3162
thrC
73% Starkeya novella DSM 506
COG0498 Threonine synthase [amino acid transport and metabolism]
4778-5017
rimL
70% Polymorphum gilvum SL003B-26A1
COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins [Ttanslation, ribosomal structure and biogenesis]
10222-8198
phaS
74% Polymorphum gilvum SL003B-26A1
TIGR01838 poly (R)-hydroxyalkanoic acid synthase, class I [fatty acid and phospholipid metabolism, Biosynthesis]
11838-13154
homD
69% Polymorphum gilvum SL003B-26A1
PRK06349 Homoserine dehydrogenase [synthesis of Met, Thr, Ile from Asp]
19761-21452
arnT
78% Starkeya novella DSM 506
COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [amino acids and vitamins transport]
22371-22703
lpxB
76% Mesorhizobium loti MAFF303099
PRK01021 lipid-A-disaccharide synthase
23930-22725
metC
65% Starkeya novella DSM 506
PRK05967 cystathionine beta-lyase [methionine and cysteine metabolism]
24090-25163
hisJ
67% Starkeya novella DSM 506
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [amino acid transport and metabolism/signal transduction mechanisms]
29290-27989 cfaS 70% Mesorhizobium opportunistum WSM2075 COG2230 Cyclopropane fatty acid synthase and related methyltransferases [cell envelope biogenesis, outer membrane]

Selected genes located in this DNA fragment are described.