Table II. Top 30 genes in PTI versus control.
Arabidopsis Genome Initiative No. | Name | Function in Plant Immunitya | NGF IS |
---|---|---|---|
At1g68520 | B-BOX DOMAIN PROTEIN14 (BBX14) | SA-mediated signaling pathway | 0.660 |
At2g02450 | LOV1 | Unknown | 0.573 |
At4g23810 | WRKY53 | Coordinates with WRKY46 in basal resistance | 0.453 |
At4g18880 | HEAT SHOCK TRANSCRIPTION FACTORA4A | Response to chitin; substrate of the MITOGEN-ACTIVATED PROTEIN KINASE3 (MPK3)/MPK6 signaling | 0.382 |
At4g01090 | Unknown | 0.379 | |
At1g72610 | GERMIN-LIKE PROTEIN GLP1 | Unknown | 0.377 |
At2g24570 | WRKY17 | Negative regulator of basal resistance | 0.361 |
At5g18150 | Unknown | 0.346 | |
At1g14370 | AVRPPHB SUSCEPTIBLE1 -LIKE2 (PBL2) | Cleaved by effector protein AvrPphB; pbl2 mutant showed significantly reduced callose deposition in 22-amino acid motif of the bacterial flagellin (flg22) and N-term of elongation factor with the first 18 amino acid residues treatment | 0.340 |
At1g69770 | CHROMOMETHYLASE3 | Involved in defense response-related DNA methylation | 0.303 |
At3g26085 | Unknown | 0.276 | |
At3g46780 | PLASTID TRANSCRIPTIONALLY ACTIVE16 | Unknown | 0.275 |
At5g04870 | CPK1 | Control onset of cell death triggered by RESISTANT TO P. SYRINGAE2 and RESISTANCE TO P. SYRINGAE PV MACULICOLA1 (RPM1) | 0.271 |
At2g38470 | WRKY33 | Key transcriptional regulator of and hormonal and metabolic responses to necrotroph | 0.268 |
At1g34310 | AUXIN RESPONSE FACTOR12 | Unknown | 0.259 |
At3g17700 | CYCLIC NUCLEOTIDE GATED CHANNEL20 | Regulation of plant-type hypersensitive response | 0.257 |
At2g29100 | GLU RECEPTOR2.9 | Unknown | 0.255 |
At5g05190 | Unknown | 0.255 | |
At4g02410 | LECTIN-LIKE PROTEIN KINASE1 | Confers Arabidopsis pathogen resistance when overexpressed | 0.250 |
At2g33500 | BBX12 | Unknown | 0.247 |
At5g25930 | Unknown | 0.245 | |
At4g09570 | CPK4 | Directly phosphorylates WRKY8/WRKY28/WRKY48 | 0.244 |
At4g14540 | NUCLEAR FACTOR Y, SUBUNIT B3 | Unknown | 0.243 |
At2g30250 | WRKY25 | Negative regulator of SA-mediated defense responses | 0.238 |
At3g59060 | PHYTOCHROME INTERACTING FACTOR 3-LIKE6 | Unknown | 0.235 |
At3g07040 | RPM1 | Resistance (R) gene | 0.233 |
At1g35420 | Unknown | 0.229 | |
At5g11060 | KNOTTED1-LIKE HOMEOBOX GENE4 | Unknown | 0.228 |
At3g55250 | PIGMENT DEFECTIVE329 | Unknown | 0.224 |
At1g75460 | Unknown | 0.222 |
Complete functional annotation of each gene and the corresponding references are provided in Supplemental Table S6.