Table III. Top 30 genes in ETI versus control.

Arabidopsis Genome Initiative No.	Name	Function in Plant Immunitya	NGF IS
At3g44720	AROGENATE DEHYDRATASE4	Regulation of the plant-type hypersensitive response	0.275
At3g57150	NAP57	Unknown	0.270
At5g46760	MYC2-RELATED BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR	Mediates the JA response	0.215
At1g63100		Unknown	0.212
At2g02450	LOV1	Unknown	0.212
At2g13650	GOLGI NUCLEOTIDE SUGAR TRANSPORTER1 (GONST1)	gonst1 plants have a dwarfed phenotype and a constitutive hypersensitive response with elevated SA levels	0.199
At1g59590	ZCF37	Unknown	0.197
At2g30250	WRKY25	Negative regulator of SA-mediated defense responses	0.174
At1g14370	PBL2	Cleaved by effector protein AvrPphB; pbl2 mutant exhibits significantly reduced callose deposition upon flg22 and N-term of elongation factor with the first 18 amino acid residues treatment	0.173
At5g52010		Unknown	0.173
At3g22780	CHINESE FOR “UGLY” (TSO1)	Unknown	0.169
At3g59220	PIRIN1	Unknown	0.165
At4g18880	HEAT SHOCK TRANSCRIPTION FACTOR A4A	Response to chitin; substrate of MPK3/MPK6 signaling	0.160
At3g56400	WRKY70	Convergence between SA and JA signaling	0.158
At1g67690		Unknown	0.155
At2g38470	WRKY33	Key transcriptional regulator of hormonal and metabolic responses to necrotroph	0.149
At1g31190	MYO-INOSITOL MONOPHOSPHATASE LIKE1	Unknown	0.149
At5g20950		Unknown	0.147
At4g19030	NODULATION26-LIKE MAJOR INTRINSIC PROTEIN1	Regulation of the defense response	0.146
At1g71260	WHY2	Defense response	0.146
At1g64280	NPR1	Master regulator of SA-mediated systemic acquired resistance	0.145
At3g16870	GATA TRANSCRIPTION FACTOR17	Unknown	0.139
At1g29120		Unknown	0.138
At1g36310		Unknown	0.137
At1g17440	CYTOKININ-HYPERSENSITIVE1, ENHANCED ETHYLENE RESPONSE4	Unknown	0.130
At3g48090	EDS1	Indispensable for immunity mediated by Toll-IL-1 receptor-nucleotide binding-Leu-rich repeat receptors; acts redundantly with SA to regulate R gene-mediated signaling	0.130
At4g29810	MITOGEN-ACTIVATED PROTEIN KINASE KINASE1	Negative regulation of the defense response	0.130
At1g28480	GLUTAREDOXIN (GRX480)	Negative regulation of the defense response	0.129
At3g02910		Unknown	0.127
At3g10640	VACUOLAR PROTEIN SORTING60.1	Unknown	0.123

^aComplete functional annotation of each gene and the corresponding references are provided in Supplemental Table S6.