TABLE 4.
miRBase ID | Accession | Experimentally Confirmed Targets (miRTarBase/miRecords) | Predicted Targets (TargetScan, Highly Conserved) | IPA Relationships (TargetScan, Poorly Conserved) |
---|---|---|---|---|
mmu-miR-125-5p | MIMAT0000136 | il1rn (Hofmann et al., 2009), tnf (Tili et al., 2007), tnfaip3 (Kim et al., 2012), mmp13 (Xu et al., 2012) | bmpr2, smad4, tnfrsf1b, vegfa | bmpr2, tnfrsf1b, smad4 |
mmu-miR-126a-3p | MIMAT0000138 | vegfa (Zhu et al., 2011) | ||
mmu-miR-141-3p | MIMAT0000153 | csf3 | hmgcs1, tnfaip3, egfr | |
mmu-miR-16-5p | MIMAT0000527 | vegfa (Karaa et al., 2009), kncc4 (Selbach et al., 2008), egfr (Selbach et al., 2008), vim (Selbach et al., 2008), smurf2 (Bockhorn et al., 2013) | cxcl1 | ptgs2 (Selbach et al., 2008), ago1, igf1 |
mmu-miR-18a-3p | MIMAT0004626 | hif1a (Hafner et al., 2010), smad4 (Dews et al., 2010), hmgcs1 (Hafner et al., 2010) | igf1, tnfaip3 | |
mmu-miR-199a-5p | MIMAT0000229 | hif1a (Rane et al., 2009), smad4 (Zhang et al., 2012b) | gsk3b, serpine1, vegfa | vegfa, ago1, ednrb, gsk3b, serpine1 |
mmu-miR-21a-5p | MIMAT0000530 | fas (Sayed et al., 2010), bmpr2 (Papagiannakopoulos et al., 2008), egfr (Zhou et al., 2010), plat (Terao et al., 2011), ptx3 (Terao et al., 2011), tnfaip3 (Terao et al., 2011), ccr1 (Terao et al., 2011), vegfa (Liu et al., 2011), mmp9 (Moriyama et al., 2009), ptk2 (Gabriely et al., 2008), arid4a (Gabriely et al., 2008) | smurf2, tnf (Zhang et al., 2012a) | |
mmu-miR-26a-5p | MIMAT0000533 | egr1 (Chi et al., 2009), smad4 (Dey et al., 2012), gsk3b (Mohamed et al., 2010), il6 (Yang et al., 2013), ago1 (Helwak et al., 2013) | mmp14, ptgs2, ptx3 | igf1 |
mmu-miR-30c-5p | MIMAT0000514 | socs1 (Zhang et al., 2013), vim (Bockhorn et al., 2013), ago1 (Helwak et al., 2013) | actc1, arid4a, ednrb, igf1 | igf1, actc1, arid4a, serpine1 |
mmu-miR-322-5p | MIMAT0000548 | cx3cl1, kcnn4, ptgs2, smurf2, vegfa |
Note: Significantly changed miRNAs are highlighted in bold.