| Dahl_R | SHR | Dahl_S | |
| Pass Solexa CHASTITY Quality Filter | 26,665,681 | 29,353,693 | 25,088,878 |
| Trimmed 3′-Adaptor | 26,355,960 | 29,079,904 | 24,418,891 |
| Aligned Reads (<= 2 Mismatches) | 17,487,378 (66.35%) | 22,242,967 (76.49%) | 13,943,565 (57.10%) |
| Multi-Aligned Reads | 3,514,549 (13.33%) | 4,576,266 (15.74%) | 2,794,800 (11.45%) |
| Uniquely Aligned Reads | 13,972,829 (53.02%) | 17,666,701 (60.75%) | 11,148,765 (45.66%) |
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