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. 2015 Mar 4;11(3):e1004986. doi: 10.1371/journal.pgen.1004986

Table 2. Primers used in this study.

qact1 Fw CCCAAATCCAACCGTGAGAAGATG
qact1 rev CCAGAGTCCAAGACGATACCAGTG
qcnt1 fw CAGACAATCGCATGGTACTATC
qcnt1 rev AGGTGAAGCGTAAGTGAGTG
qpDF16-vect2 fw ATAATACCGCGCCACATAGC
qpDF16-vect2 rev CCAGAAACGCTGGTGAAAGT
qcnt2 L fw GCATCTATTGTACTCTCTC
qcnt2 L rev GAAGGATGGATATGCACGT
qcnt2 M fw GTTAATTGCCATTCTTTGGCG
qcnt2 M rev ATGACATGGCGTGGAAAGTC
qcnt2 N fw CATTAAACAAACAACGGCACAC
qcnt2 N rev TAAGCCAGCAAATTCCTTGAG
qcnt2 O fw GACTATAACTAGACCACTCAG
qcnt2 O rev CTAGATGAATACTCAAGAAAGC
qcnt2 P fw CTGCATATTCGACATCTTGAG
qcnt2 P rev AGCCTGTCCATCGCAAAAGG
CC2-F1 (J) TACTACGGATCCCCCCATGGAATAAT
CC2-R1(J) TACTACGTCGACCTCGAGATCTCAGTGCTCGCTTCTGTGTAA
CC2-F2 (K) TACTACGGATCCGCGAGCACTGTTTACATCTAA
CC2-R2(K) TACTACGTCGACCTCGAGATCTCGTCAAGTTTACAACTCGGT
CC2-F3(L) TACTACGGATCCACCGAGTTGTAAACTTGACG
CC2-R3(L) TACTACGTCGACCTCGAGATCTACAAATAGAATATGCTAACGC
CC2-F4(M) TACTACGGATCCGCGTTAGCATATTCTATTTGTC
CC2-R4(M) TACTACGTCGACCTCGAGATCTTGCGAGTTATGTGTATCTAC
CC2-F5(N) TACTACGGATCCGTAGATACACATAACTCGCA
CC2-R5(N) TACTACGTCGACCTCGAGATCTGGGGTCCTAGATTACGTCTT
CC2-F6(O) TACTACGGATCCAATCTAGGACCCCTACGTTTT
CC2-R6(O) TACTACGTCGACCTCGAGATCTCCCTTGGAAATACCTAGC
CC2-F7(P) TACTACGGATCCGCTAGGTATTTCCAAGGGCTCC
CC2-R7(P) TACTACGTCGACCTCGAGATCTTCCACCACAAATAGTTCAGC
CC2-F8(Q) TACTACGGATCCGCTGAACTATTTGTGGTGGAC
CC2-R8(Q) TACTACGTCGACCTCGAGATCTAAAGGGTATAAACGGCTATC
RegionL1-Lacz Fw TACTACCTGCAGCTTGTCGCAAAACATAAAGC
RegionL1-Lacz rev TACTACCTCGAGGTAAGTTTCTAAACAGGA
RegionL2-Lacz Fw TACTACCTGCAGCGATAAACGTATGATTGCTTTCACC
RegionL2-Lacz rev TACTACCTCGAGGAGAGAGTACAATAGATGC
RegionM1-Lacz Fw TACTACCTGCAGCGTACCTTTTGACCTTTAAG
RegionM1-Lacz rev TACTACGTCGACTCGAG CCGTATTTCACTTAAACGAG
RegionM2-Lacz Fw TACTACCTGCAGTGCGAGTTATGTGTATCTAC
RegionM2-Lacz rev TACTACGTCGACTCGAGCTCGTTTAAGTGAAATACGG
RegionO1-Lacz Fw TACTACCTGCAGCCCTTGCCAGTAATGTGTAT
RegionO1-Lacz rev TACTACCTCGAGCGCATTGAATTTTAGACTG
RegionO2-Lacz Fw TACTACCTGCAGCATTCAAATTGCGTCAAC
RegionO2-Lacz rev TACTACCTCGAGCCAAGTATATGTGTTCTACC
RegionP1-Lacz Fw TACTACCTGCAGAACCAGATTTAATTAACGGCC
RegionP1-Lacz rev TACTACCTCGAGGAAGCACTACTAAGATTAC
RegionP2-Lacz Fw TACTACCTGCAGGTCGATTTTTCGAACTTTCTGC
RegionP2-Lacz rev TACTACCTCGAGTTGGATTCGAAGGTCTTTAC
probe cc2 F CGTGCACATTTGTGAAAAGG
probe cc2 rev TCTCGCGATTAGTTTGTAAAG
probe cc1 F CCATTTGCTAAGTTCGACTC
probe cc1 rev CAGTATTTGTATCGTAGTGG