Table 2.
Comparison of proteases and genes related with bacteriocin in the Prevotella intermedia strains
| a. The specific proteases of the Prevotella intermedia strains. Note the genes involved in bacteriocin | |||
|---|---|---|---|
| Pi ZT | Pi 17 | Pi ATCC 25611 | Annotation |
| 107096 | - | - | Peptidase S41 |
| 108006 | - | - | CAAX protease |
| 108029 | - | - | Hypothetical protein |
| 114036 | - | - | Peptidase M23 |
| 118026 | - | - | DJ-1/PfpI family protein |
| 126005 | - | - | ATP-dependent serine protease |
| 134012 | - | - | Hypothetical protein |
| 134014 | - | - | Hypothetical protein |
| 139007 | - | - | Peptidase |
| 142001 | - | - | Bacteriocin |
| 142003 | - | - | Peptidase inhibitor I9 domain protein |
| 142004 | - | - | Bacteriocin |
| - | 387131655 | - | Putative bacteriocin |
| - | 387131961 | - | Putative bacteriocin |
| - | 387132117 | - | Putative caudovirus prohead protease |
| - | 387132819 | - | Putative caudovirus prohead protease |
| - | 387133830 | - | Hypothetical protein PIN17_A1967 |
| - | 387132710 | - | Peptidase, M23 family |
| - | - | 2515938070 | ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
| - | - | 2515938139 | Hypothetical protein |
| - | - | 2515938401 | Hypothetical protein |
| - | - | 2515939618 | Membrane-bound metallopeptidase |
| - | - | 2515939771 | ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
| - | - | 2515940199 | Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
| b. The genes involved in bacteriocin in the Prevotella intermedia strains | |||
| 103143 | 387132014 | 2515939098 | Lantibiotic ABC transporter |
| 120031; 140001; 141001 | - | 2515939774; 2515938065 | ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
| - | - | 2515938070 | ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
| - | - | 2515939771 | ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
| 120005 | 387131983; 387131657 | 2515939795; 2515939797 | Bacteriocin/Subtilisin-like serine proteases |
| - | 387131961 | - | Putative bacteriocin |
| - | 387131655 | - | Putative bacteriocin |
| 142001 | - | - | Bacteriocin |
| 142002 | - | - | Bacteriocin |
| 142004 | - | - | Bacteriocin |