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. 2015 Mar 4;20(3):036003. doi: 10.1117/1.JBO.20.3.036003

Fig. 1.

Fig. 1

Processing pipeline of structure tensor (ST) analysis of serial optical coherence scanner (SOCS) images. The optical contrasts are generated for each volumetric scan. En-face images of reflectivity (R) and retardance (δ) are calculated for two-dimensional (2-D) ST computation. Stacked en-face retardance images and stitched optical sections of the cross-polarization (C) contrast are utilized for three-dimensional (3-D) ST computation. The computed orientation maps are obtained through eigen-decomposition of ST and validated by the en-face optic axis orientation images. Tractography is conducted based on the 3-D ST.