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Performance of KLEAT on three ENCODE cell lines. Curves represent the true positive rate (TPR) as a function of the false discovery rate (FDR), for KLEAT with Trans-ABySS (blue) and KLEAT with Trinity (green) and Cufflinks (red). RNA-PET evidence is considered as the gold standard at two support cutoffs: left column: 3 or more, right column: 10 or more RNA-PET reads.
