Table 5.
Expected heterozygosities (H e ) and F ST values obtained after 100,000 simulation runs of the Bayesian Test method of Beaumont and Balding (LOSITAN) and the frequentist method based on moment (FDIST) for six unlinked polymorphisms at the HSP90AA1 gene promoter
| LOSITAN | FDIST | |||||||
|---|---|---|---|---|---|---|---|---|
| Locus | Het | Fst | P(Simul Fst < sample Fst) | Het | Fst | P(Simul Fst < sample Fst) | ||
| g.703_704del(2)A | 0.48 | 0.14 | 0.9957* | directional | 0.48 | 0.14 | 0.9380 | |
| g.667_668insC | 0.34 | 0.09 | 0.7658 | 0.34 | 0.09 | 0.4750 | ||
| g.666_667insC | 0.17 | 0.07 | 0.5154 | 0.17 | 0.07 | 0.2534 | ||
| g.601A > C | 0.25 | 0.06 | 0.3443 | 0.25 | 0.06 | 0.1145 | ||
| g.522A > G | 0.04 | 0.02 | 0.0203* | balancing | 0.04 | 0.02 | 0.0174* | balancing |
| g.516_517insG | 0.16 | 0.09 | 0.7049 | 0.16 | 0.09 | 0.4718 | ||
*Indicates significant values.