Table 3.
The transcription factors with over-represented targets or interacting genes and/or proteins in the list of dysregulated genes, ranked by lowest P-value (P < 0.05)
| Transcription factor | P-value | |||||
|---|---|---|---|---|---|---|
| Broad GSEA | Broad GSEA | Metacore™ | ||||
| All | pH 4 | TCDC | pH 4 TCDC | All – over-represented targets | All – over-represented interacting genes/proteins | |
| HNF4α | 0.00218 | 0.000732 | 0.00000382 | |||
| p65 NF-kB subunit | 0.000912 | |||||
| SF1 | 0.0040 | 0.0115 | 0.0295 | |||
| PTF1A | 0.0324 | 0.0231 | 0.0560 | 0.0245 | ||
| STAT1 | 0.1020 | 0.0255 | ||||
| TCF11 < br > MAFG | 0.0697 | 0.0306 | ||||
TCDC, taurochenodeoxycholate.