Table 4.
HPV16 LCR sequence variations with regard to the reference sequence K02718.1. The table also shows the putative transcriptional factor binding sites in the nucleotide altered.
| Genome position | Nucleotide variation | Number of isolates | Transcriptional factor |
|---|---|---|---|
| 7175 | A/C | 1/23 | C/EBPbeta |
| 7194 | G/T | 10/23 | |
| 7229 | A/C | 1/23 | C/EBPbeta |
| 7234 | A/C | 10/23 | |
| 7258 | G/A | 1/23 | YY1 |
| 7281 | G/T | 1/23 | |
| 7316 | A/C | 1/23 | YY1, AP-1 |
| 7340 | A/T | 7/23 | C/EBPbeta |
| 7360 | A/G | 1/23 | |
| 7361 | G/C | 1/23 | |
| 7395 | C/T | 7/23 | C/EBPbeta |
| 7434 | Ins C | 23/23 | NF-1, YY1 |
| 7436 | C/G | 23/23 | YY1 |
| 7441 | T/G | 1/23 | YY1 |
| 7485 | A/C | 9/23 | NF1 |
| 7490 | G/A | 9/23 | |
| 7521 | G/A | 10/23 | YY1 |
| 7670 | C/T | 9/23 | |
| 7690 | C/A | 9/23 | E2 |
| 7730 | A/C | 8/23 | Oct-1 |
| 7730 | A/T | 1/23 | Oct-1 |
| 7747 | T/G | 7/23 | C/EBPbeta |
| 7768 | C/T | 9/23 | NF-1 |
| 7790 | C/T | 1/23 | YY1 |
| 7790 | C/T | 9/23 | YY1 |
| 7838 | G/T | 2/23 | C/EBPbeta |
| 7869 | Del A | 23/23 | E2 |
| 7874 | G/A | 1/23 | NF-1 |
| 7881 | C/A | 1/23 | C/EBPbeta |
| 7891 | C/G | 7/23 | C/EBPbeta |