Table 2.
List of genes constituting a 13-gene profile and TaqMan probes used in qRT-PCR analysis
| Gene symbols | Gene names | Human assay ID | Amplicon length (bp) |
|---|---|---|---|
| CDK4 | Cyclin dependent kinase 4 | Hs00175935_m1 | 65 |
| CCNC | Cyclin C | Hs00193177_m1 | 78 |
| PTK2 | Focal adhesion kinase (protein tyrosine kinase 2) | Hs00178587_m1 | 68 |
| MYC | v-myc avian myelocytomatosis viral oncogene homolog | Hs99999003_m1 | 65 |
| BARD1 | BRCA1 associated RING domain 1 | Hs00184427_m1 | 73 |
| RAD51 | RAD51 homolog | Hs00153418_m1 | 58 |
| FANCG | Fanconi anemia group G | Hs00184947_m1 | 116 |
| PCNA | Proliferating cell nuclear antigen | Hs00696862_m1 | 95 |
| PRCC | Papillary renal cell carcinoma-translocation associated | Hs00410541_m1 | 77 |
| TPR | Translocated promoter region | Hs00162918_m1 | 82 |
| CTTN | Cortactin | Hs00193322_m1 | 81 |
| DSP | Desmoplakin | Hs00189422_m1 | 74 |
| HDGF | Hepatoma-derived growth factor | Hs00610314_m1 | 110 |
| ACTB | Actin, beta, cytoplasmic | Hs00357333_g1 | 77 |
| GAPDH | Glyceraldehyde-3-phosphate dehydrogenase | Hs99999905_m1 | 122 |
| TFRC | Transferrin receptor | Hs99999911_m1 | 105 |
Selected controls: ACTB, GAPDH, TFRC