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. 2015 Feb 10;7(2):559–589. doi: 10.3390/v7020559

Table 2.

List of FDR (Benjamin-Hochberg False Discovery Rate) adjusted p-values that were less than 0.05/3 using all 547 spots in each group. The assumed co-dependence of the three groups (I, II, and III) prompted the Bonferroni-like adjustment to enhance the criterion for significance to 0.0167 rather than the customary 0.05. ∆ fold values relative to C are determined by dividing the geometric mean of each group by the geometric mean of C. Fold increases less than one are reported as geometric mean C/geometric mean group. Blank entries in the table represent FDR adjusted p-values > 0.0167.

Spot FDR Adjusted p-Value I vs. C FDR Adjusted p-Value II vs. C FDR Adjusted p-Value III vs. C Mol. Wt ∆ Fold I ∆ Fold II ∆ Fold III
1 131 0.001 0.001 0.000 62,450 −33.0 −34.2 −45.7
2 136 0.001 0.006 0.000 59,941 −34.2 −24.2 −50.2
3 146 0.009 0.001 55,874 −19.2 −12.5 −30.6
4 160 0.008 0.016 0.012 54,420 −20.3 −18.2 −19.4
5 370 0.007 26,948 −21.2 −9.4 −7.2
6 458 0.016 19,388 −9.9 −6.7 −17.7
7 490 0.012 0.016 16,089 −17.5 −19.1 −15.0
8 546 0.003 6744 −25.3 −9.9 −15.5