Table 7.
Performance evaluation to remove adapter sequences.
| Tool | Dataset | Time | Memory |
|---|---|---|---|
| G-CNVa | SRR001220 | 1 min 14 s | 17 MB |
| SRR001205 | 2 min 46 s | 21 MB | |
| SRR005720 | 8 min 12 s | 26 MB | |
| SRR921889 | 17 min 11 s | 20 MB | |
| G-CNVb | SRR001220 | 11 s | 0.4 GB |
| SRR001205 | 26 s | 0.46 GB | |
| SRR005720 | 21 s | 0.33 GB | |
| SRR921889 | 6 min 10 s | 0.84 GB | |
| FASTX-Toolkit | SRR001220 | 3 min 21 s | 516 KB |
| SRR001205 | 4 min 47 s | 516 KB | |
| SRR005720 | – | – | |
| SRR921889 | 57 min 40 s | 516 KB | |
| NGS QC Toolkita | SRR001220 | 8 min 52 s | 217 MB |
| SRR001205 | 17 min 30 s | 189 MB | |
| SRR005720 | 1 h 48 min | 269 MB | |
| SRR921889 | 3 h 55 min | 226 MB | |
| NGS QC Toolkitb | SRR001220 | 2 min 10 s | 1.6 GB |
| SRR001205 | 3 min 10 s | 1.3 GB | |
| SRR005720 | 20 min 24 s | 1.13 GB | |
| SRR921889 | 39 min | 1.6 GB |
The first and the second column of the table report the tool and the analyzed library, respectively. Column third reports the computing time required to analyze the different libraries. The fourth column the peak of memory required to perform the analysis.