Table 3.

Precision and recall for predicting distal P300, gene-distal regulatory modules and VISTA enhancers

Cell type	Data set	Spectacle	ChromHMM
GM12878	Distal P300	0.129, 0.421	0.116, 0.407
	DRM [43]	0.190, 0.375	0.174, 0.369
	VISTA	0.001, 0.048	0.001, 0.053
H1-hESC	Distal P300	0.102, 0.477	0.144, 0.342
	DRM [43]	0.115, 0.468	0.160, 0.332
	VISTA	0.004, 0.273	0.005, 0.149
K562	Distal P300	0.060, 0.204	0.057, 0.196
	DRM [43]	0.039, 0.178	0.039, 0.181
	VISTA	0.002, 0.133	0.002, 0.129

Note that VISTA enhancers are not specific to these cell types.

DRM, gene-distal regulatory module.