Table 2.
SNPs | Genotype/allele distribution | Healthy controls n = 600 |
HCV patients n = 678 |
OR (95% C.I.) | χ 2 | P value |
---|---|---|---|---|---|---|
rs8105790 | 2.784 (2.340–3.311) | 137.99 | <0.0001 | |||
CC | 16 (2.7%) | 159 (23.4%) | ||||
CT | 233 (38.8%) | 280 (41.3%) | ||||
TT | 351 (58.5%) | 239 (35.3%) | ||||
C | 265 (22.1%) | 598 (44.1%) | ||||
T | 935 (77.9%) | 758 (55.9%) | ||||
CC + CT versus TT | 2.589 (2.065–3.247) | 69.23 | <0.0001 | |||
CC versus CT + TT | 0.089 (0.053–0.152) | 116.35 | <0.0001 | |||
| ||||||
rs8099917 | 2.552 (2.062–3.160) | 77.16 | <0.0001 | |||
GG | 14 (2.3%) | 104 (15.3%) | ||||
GT | 114 (19.0%) | 138 (20.4%) | ||||
TT | 472 (78.7%) | 436 (64.3%) | ||||
G | 142 (11.8%) | 346 (25.5%) | ||||
T | 1058 (88.2%) | 1010 (74.5%) | ||||
GG + GT versus TT | 2.047 (1.593–2.630) | 31.91 | <0.0001 | |||
GG versus GT + TT | 0.132 (0.075–0.233) | 64.25 | <0.0001 | |||
| ||||||
rs7248668 | 1.863 (1.533–2.264) | 39.72 | <0.0001 | |||
AA | 58 (9.7%) | 94 (13.9%) | ||||
AG | 79 (13.2%) | 172 (25.4%) | ||||
GG | 463 (77.2%) | 412 (60.7%) | ||||
A | 195 (16.3%) | 360 (26.5%) | ||||
G | 1005 (83.8%) | 996 (73.5%) | ||||
AA + AG versus GG | 2.182 (1.708–2.788) | 39.65 | <0.0001 | |||
AA versus AG + GG | 0.665 (0.470–0.941) | 5.35 | 0.0206 | |||
| ||||||
rs12979860 | 1.476 (1.250–1.743) | 21.15 | <0.0001 | |||
TT | 59 (9.9%) | 73 (10.8%) | ||||
CT | 230 (38.6%) | 367 (54.1%) | ||||
CC | 307 (51.5%) | 238 (35.1%) | ||||
T | 348 (29.2%) | 513 (37.8%) | ||||
C | 844 (70.8%) | 843 (62.2%) | ||||
TT + CT versus CC | 1.964 (1.568–2.460) | 34.88 | <0.0001 | |||
TT versus CT + CC | 0.911 (0.634–1.308) | 0.26 | 0.61213 | |||
| ||||||
rs12980275 | 1.765 (1.488–2.093) | 42.97 | <0.0001 | |||
GG | 59 (9.8%) | 89 (13.12%) | ||||
AG | 184 (30.7%) | 327 (48.2%) | ||||
AA | 357 (59.5%) | 262 (38.6%) | ||||
G | 302 (25.2%) | 505 (37.2%) | ||||
A | 898 (74.8%) | 851 (62.8%) | ||||
GG + AG versus AA | 2.333 (1.863–2.920) | 55.44 | <0.0001 | |||
GG versus AG + AA | 0.722 (0.509–1.023) | 3.37 | 0.06631 |
Risk allele marked in BOLD letter.