Table 4.
SNPs | Genotype/allele distribution | (Chronic HCV) n = 518 |
(Cirr + HCC) n = 160 |
OR (95% C.I.) | χ ² | P value |
---|---|---|---|---|---|---|
rs8105790 | 1.049 (0.815–1.350) | 0.14 | 0.710 | |||
CC | 119 (23%) | 40 (25%) | ||||
CT | 216 (42%) | 64 (40%) | ||||
TT | 183 (35%) | 56 (35%) | ||||
C | 454 (43.8%) | 144 (45%) | ||||
T | 582 (56.2%) | 176 (55%) | ||||
CC + CT versus TT | 1.014 (0.700–1.471) | 0.01 | 0.939 | |||
CC versus CT + TT | 0.895 (0.592–1.351) | 0.28 | 0.596 | |||
| ||||||
rs8099917 | 0.986 (0.739–1.315) | 0.01 | 0.923 | |||
GG | 80 (15.4%) | 24 (15%) | ||||
GT | 105 (20.3%) | 33 (20.6%) | ||||
TT | 333 (64.3%) | 103 (64.4%) | ||||
G | 265 (25.6%) | 81 (25.3%) | ||||
T | 771 (74.4%) | 239 (74.7%) | ||||
GG + GT versus TT | 0.996 (0.688–1.442) | 0 | 0.983 | |||
GG versus GT + TT | 1.035 (0.631–1.698) | 0.02 | 0.891 | |||
| ||||||
rs7248668 | 1.204 (0.912–1.590) | 1.72 | 0.190 | |||
AA | 65 (12.5%) | 29 (18.1%) | ||||
AG | 136 (26.3%) | 36 (22.5%) | ||||
GG | 317 (61.2%) | 95 (59.4%) | ||||
A | 266 (25.7%) | 94 (29.4%) | ||||
G | 770 (74.3%) | 226 (70.6%) | ||||
AA + AG versus GG | 1.079 (0.752–1.549) | 0.17 | 0.679 | |||
AA versus AG + GG | 0.648 (0.402–1.046) | 3.18 | 0.074 | |||
| ||||||
rs12979860 | 1.167 (0.903–1.507) | 1.39 | 0.238 | |||
TT | 50 (9.7%) | 23 (14.4%) | ||||
CT | 283 (54.6%) | 84 (52.5%) | ||||
CC | 185 (35.7%) | 53 (33.1%) | ||||
T | 383 (37%) | 130 (40.6%) | ||||
C | 653 (63%) | 190 (59.4%) | ||||
TT + CT versus CC | 1.122 (0.771–1.632) | 0.36 | 0.548 | |||
TT versus CT + CC | 0.636 (0.375–1.080) | 2.84 | 0.092 | |||
| ||||||
rs12980275 | 0.929 (0.716–1.206) | 0.3 | 0.580 | |||
GG | 69 (13%) | 20 (12.5%) | ||||
AG | 252 (49%) | 75 (46.9%) | ||||
AA | 197 (38%) | 65 (40.6%) | ||||
G | 390 (38%) | 115 (36%) | ||||
A | 646 (62%) | 205 (64%) | ||||
GG + AG versus AA | 0.897 (0.625–1.288) | 0.35 | 0.555 | |||
GG versus AG + AA | 1.076 (0.631–1.832) | 0.07 | 0.788 |
Risk allele marked in BOLD letter.