Table 2. Results of the transmission disequilibrium test.
Central European | Northern European | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
Mutation | A1 a | A2 b | Freq c | T / U d | OR e | P f | Freq c | T / U d | OR e | P f |
c.2282del4 | del | Wild type | 0.059 | 189 / 91 | 2.08 | < 10−6 | 0.047 | 83 / 40 | 2.07 | 7.26 x 10−5 |
p.R501X | T | C | 0.034 | 97 / 47 | 2.06 | 5.70 x 10−5 | 0.012 | 27 / 13 | 2.08 | 0.058 |
p.R2447X | T | C | 0.010 | 29 / 17 | 1.71 | 0.27 | 0.014 | 8 / 22 | 0.36 | 0.01 |
p.S3247X | A | C | 0.002 | 6 / 1 | 6 | 0.31 | 0.004 | 8 / 6 | 1.33 | 1 |
Combined | Mutation | Wild type | 0.105 | 316 / 150 | 2.11 | < 10−6 | 0.085 | 125 / 78 | 1.60 | 0.001 |
a A1 is the mutant allele.
b A2 is the wild type allele.
c Allele frequency of A1 in the family founders.
d Number of transmitted (T) and un-transmitted (U) A1 alleles.
e Odds ratio calculated as the ratio of transmitted versus un-transmitted alleles.
f Empirical p value calculated by flipping transmitted/untransmitted status in order to account for multiple affected siblings in each family.