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. 2015 Feb 19;71(Pt 3):277–285. doi: 10.1107/S2053230X15000783

Table 3. The numbers of hydrogen bonds and salt bridges between monomers in the dodecamers of APDkam589 and TET peptidases from P. horikoshii .

The calculations were performed using the PISA server (http://www.ebi.ac.uk/pdbe/pisa).

  APDkam589 PhTET1 PhTET1 PhTET2 PhTET3
PDB entry 4wwv 2wyr 2cf4 1xfo 2wzn
Sequence identity to APDkam589 (%)   37 37 48 41
Between monomers in the dimer
No. of hydrogen bonds 21 32 28 20 24
No. of salt bridges 4 2 8 16 8
Between monomers in the trimer
No. of hydrogen bonds 11 12 8 2 10
No. of salt bridges 1 9 5 4 2
Total No. of salt bridges between different monomers in the dodecamer
No. of hydrogen bonds 258 336 264 144 264
No. of salt bridges 36 120 108 144 72