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. 2015 Feb 26;71(Pt 3):427–441. doi: 10.1107/S1399004714025061

Table 5. Crystallographic data and refinement statistics.

PDB entry 4b49 4b4e 4b4i 4b4j
MPD added None (R) (S) (RS)
Data collection
Space group P43212 P43212 P43212 P43212
Unit-cell parameters
a = b () 76.84 77.53 77.44 77.67
c () 38.69 37.89 37.94 37.70
= = () 90 90 90 90
Resolution () 20.001.15 (1.171.15) 15.001.00 (1.021.00) 30.001.20 (1.221.20) 30.001.25 (1.271.25)
Total reflections 562743 853125 512028 456741
Unique reflections 41718 (2040) 62397 (3076) 36597 (1806) 32449 (1584)
R merge 0.08 (0.76) 0.07 (0.82) 0.08 (0.79) 0.06 (0.56)
I/(I) 41.5 (3.2) 43.3 (2.5) 45.1 (3.6) 45.9 (5.5)
Completeness (%) 99.8 (99.1) 99.3 (99.0) 99.7 (100.0) 99.8 (99.6)
Multiplicity 13.5 (10.9) 13.7 (11.2) 14.0 (12.7) 14.1 (13.2)
Mosaicity () 0.32 0.26 0.46 0.43
Overall B factor (2) 15.5 13.4 17.2 15.1
V M (3Da1) 2.03 2.03 2.03 2.03
Solvent content (%) 39.6 39.6 39.4 39.3
Refinement
Resolution () 18.671.15 (1.181.15) 13.301.00 (1.031.00) 21.491.20 (1.231.20) 27.051.25 (1.281.25)
Reflections [R cryst + R free (5%)] 39425 + 2089 59136 + 3155 34682 + 1825 30732 + 1643
R cryst/R free (%) 12.7/15.1 (22.2/25.6) 12.4/14.4 (25.0/25.7) 12.9/16.7 (18.8/22.1) 13.05/15.57 (18.1/22.7)
No. of atoms
Protein (No. of residues) 1001 (129) 1000 (129) 1000 (129) 1001 (129)
MPD§   16 (2; R) 16 (2; S) 16 (2; R)
Ions/ligands (No. of molecules) 11 (4) 3 (3) 2 (2) 2 (2)
Water 267 196 188 162
B factors (2)
Protein 12.9 11.9 15.2 13.7
MPD   12.3 21.4 13.1
Ions/ligands 13.1 14.2 17.7 15.4
Water 26.2 21.6 28.3 24.6
R.m.s. deviation from ideal
Bond lengths () 0.009 0.008 0.007 0.007
Bond angles () 1.349 1.306 1.214 1.272
Ramachandran plot
Most favored (%) 90.3 90.3 88.5 87.6
Additionally favored (%) 9.7 9.7 11.5 12.4
Disallowed (%) 0.0 0.0 0.0 0.0

Values in parentheses are for the highest resolution shell.

Atom OXT (residue Leu129) was omitted during the refinement for structures 4b4e and 4b4j.

§

The number of molecules in the structure and the enantiomer are given in parentheses.