TABLE 1.
Summary of the BLASTP search results of the polypeptide P1 encoded by ORF1 and RNA-dependent RNA polymerase (RdRp) encoded by ORF2 of Botrytis cinerea RNA virus 1 (BcRV1)
| Search target and virus name (GenBank accession no.)a | Size (aa) | % identity | Overlap (positions) | Bit score | E value |
|---|---|---|---|---|---|
| P1 search | |||||
| GaTV2 (ADO60932) | 1,313 | 93 | 1227/1314 | 2,439 | 0.0 |
| SsNsV-L (YP_006331064) | 1,305 | 77 | 1018/1317 | 2,085 | 0.0 |
| FgV3 (YP_003288788) | 1,369 | 45 | 587/1304 | 1,040 | 0.0 |
| FvV1 (AEZ54147) | 1,311 | 31 | 327/1054 | 378 | 7e−107 |
| FvV2 (AEZ54145) | 1,347 | 32 | 253/794 | 358 | 1e−99 |
| PgV2 (CAJ34334) | 1,696 | 26 | 112/427 | 109 | 5e−21 |
| PiRV3 (AEX87901) | 1,296 | 22 | 124/556 | 71.2 | 2e−09 |
| RdRp search | |||||
| SsNsV-L (YP_006331065) | 1,338 | 71 | 956/1338 | 1,961 | 0.0 |
| GaTV2 (ADO60933)b | >613 | 93 | 571/613 | 1,162 | 0.0 |
| FgV3 (ACY56323) | 1,311 | 45 | 592/1327 | 1,067 | 0.0 |
| FvV1 (AEZ54148) | 1,289 | 33 | 412/1266 | 568 | 8e−176 |
| FvV2 (AEZ54146) | 1,310 | 33 | 426/1274 | 565 | 3e−174 |
| DsRV1 (ACD91658) | 1,110 | 31 | 329/1064 | 410 | 4e−119 |
| PgV2 (CAJ34335) | 1,153 | 37 | 230/614 | 341 | 5e−95 |
| PiRV3 (AEX87902) | 1,011 | 32 | 193/605 | 249 | 2e−65 |
a
See legend to Fig. 5 for abbreviations of the virus names.
b
The RdRp sequence of GaTV2 is incomplete in the NCBI database.