Table 1.
PCR primers used for E. coli virulence genes amplification
| Targets | Primer | Oligonucleotide sequence (5’-3’) | Amplicon size (bp) | Reference |
|---|---|---|---|---|
| iucD | iucD-F | ACAAAAAGTTCTATCGCTTCC | 714 | [17] |
| iucD-R | CCTGATCCAGATGATGCTC | |||
| irp2 | irp2-F | AAGGATTCGCTGTTACCGGAC | 280 | [18] |
| irp2-R | TCGTCGGGCAGCGTTTCTTCT | |||
| papC | papC-F | TGATATCACGCAGTCAGTAGC | 501 | [19] |
| papC-R | CCGGCCATATTCACATAA | |||
| iss | iss-F | ATCACATAGGATTCTGCCG | 309 | [17] |
| iss-R | CAGCGGAGTATAGATGCCA | |||
| tsh | tsh-F | ACTATTCTCTGCAGGAAGTC | 824 | [17] |
| tsh-R | CTTCCGATGTTCTGAACGT | |||
| vat | vat-F | TCCTGGGACATAATGGTCAG | 1000 | [17] |
| vat-R | GTGTCAGAACGGAATTGT | |||
| cva | cva-F | TGGTAGAATGTGCCAGAGCAAG | 1200 | [17] |
| cva-R | GAGCTGTTTGTAGCGAAGCC |