Table 1.
Mean rate and 95% credible interval (substitutions/site/year) | ||
---|---|---|
Virus data set and number of sequences (reduced-age/complete data) | Complete data set | Reduced-age data set |
ASFV (22/50) | 3.61 × 10−5 (3.31 × 10−5 – 4.29 × 10−5) | 4.58 × 10−5 (3.39 × 10−5 – 1.40 × 10−4) |
BYDV (17/27) | 2.39 × 10−5 (1.94 × 10−5 – 3.46 × 10−3) | 2.81 × 10−5 (2.12 × 10−5 – 4.62 × 10−5) |
CaPV (20/37) | 6.50 × 10−5 (6.04 × 10−5 – 7.11 × 10−5) | 8.56 × 10−5 (6.17 × 10−5 – 2.21 × 10−4) |
CYDV (45/76) | 1.79 × 10−3 (1.75 × 10−4 – 7.89 × 10−3) | 2.35 × 10−3 (2.57 × 10−4 – 761 × 10−3) |
DENV-4 (32/49) | 1.12 × 10−3 (5.38 × 10−5 – 4.09 × 10−3) | 1.51 × 10−3 (7.48 × 10−5 – 4.23 × 10−3) |
EBOV (17/32) | 3.89 × 10−4 (1.92 × 10−4 – 7.15 × 10−4) | 4.75 × 10−4 (1.99 × 10−4 – 1.11 × 10−3) |
HBV (15/34) | 2.06 × 10−4 (1.51 × 10−4 – 3.90 × 10−4) | 2.34 × 10−4 (1.54 × 10−4 – 6.78 × 10−4) |
HIV-1 (17/29) | 3.21 × 10−3 (2.59 × 10−3 – 4.15 × 10−3) | 4.06 × 10−3 (2.62 × 10−3 – 8.59 × 10−3) |
RABV (16/48) | 4.56 × 10−4 (3.48 × 10−4 – 6.64 × 10−4) | 5.33 × 10−4 (3.36 × 10−4 – 1.05 × 10−3) |
HIV-2 + SIV (18/30) | 1.03 × 10−3 (6.79 × 10−4 – 1.56 × 10−3) | 1.42 × 10−3 (7.00 × 10−4 – 4.54 × 10−3) |
The abbreviations correspond to those in Figure 1.