Table 4.
Summary of tagged smORFs from non-coding RNAs and uORFs
| smORF | Localization | Peptidomic evidence | # aa | RPKM | Coverage | TE | PhastCons |
|---|---|---|---|---|---|---|---|
| pncr009:3L ORF1 | Other cytoplasmic | No | 21 | 135.7 | 1.00 | 0.29 | 0.44 |
| pncr009:3L ORF2 | Limited | No | 30 | 64.7 | 0.58 | 0.63 | 0.49 |
| pncr009:3L ORF3 | Limited | No | 33 | 47.8 | 0.78 | 0.23 | 0.59 |
| CR30055 ORF1 | Not tested | No | 12 | 15.2 | 0.71 | 1.24 | 0.49 |
| CR30055 ORF2 | Mitochondrial | No | 53 | 26.1 | 0.66 | 0.83 | 0.52 |
| CR30055 ORF3 | Not tested | No | 36 | 54.6 | 0.85 | 2.90 | 0.55 |
| CR30055 ORF4 | Limited | No | 17 | 30.0 | 0.64 | NA | 0.54 |
| CR30055 ORF5 | Limited | No | 56 | 28.0 | 0.85 | 3.7 | 0.55 |
| Uhg2-ORF 1 | None | No | 36 | 10.5 | 0.27 | 0.83 | 0.54 |
| FBtr 0072084_1 | Reticular | No | 14 | 46.8 | 0.76 | 4.35 | 0.52 |
| FBtr 0072210_1 | Other cytoplasmic | No | 13 | 97.7 | 0.92 | 4.34 | 0.48 |
| FBtr 0081720_1 | Limited | No | 11 | 121.3 | 1.00 | 2.39 | 0.55 |
Details of the Poly-Ribo-Seq and transfection translation assay results for the FLAG-tagged smORFs translated from non-coding RNAs and uORFs, with RPKM, coverage and TE values.