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. 2014 Sep 16;3:e03523. doi: 10.7554/eLife.03523

Table 1.

Data sets used in the study

DOI: http://dx.doi.org/10.7554/eLife.03523.003

Species		GEO Accession	Mapped reads (millions)	Max read length (bp)	Description	Reference
Mouse M. musculus	RNA-seq	GSE30839	226.0	43	ES cells, E14	Ingolia et al., 2011
Mouse M. musculus	Ribosome profiling	GSE30839	39.2	47	ES cells, E14	Ingolia et al., 2011
Human H. sapiens	RNA-seq	GSE22004	29.8	36	HeLa cells	Guo et al., 2010
Human H. sapiens	Ribosome profiling	GSE22004	78.3	36	HeLa cells	Guo et al., 2010
Zebrafish D. rerio	RNA-seq	GSE32900	1382.2	2 × 75	Series of developmental stages	Chew et al., 2013
Zebrafish D. rerio	Ribosome profiling	GSE46512	1040.0	44	Series of developmental stages	Chew et al., 2013
Fruit fly D. melanogaster	RNA-seq	GSE49197	1317.9	50	0–2hr embryos, wild type	Dunn et al., 2013
Fruit fly D. melanogaster	Ribosome profiling	GSE49197	105.7	50	0–2hr embryos, wild type	Dunn et al., 2013
Arabidopsis A. thaliana	RNA-seq	GSE50597	79.8	51	No stress conditions, TRAP purification	Juntawong et al., 2014
Arabidopsis A. thaliana	Ribosome profiling	GSE50597	140.3	51	No stress conditions, TRAP purification	Juntawong et al., 2014
Yeast S. cerevisiae	RNA-seq	GSE52119	20.54	50	GSY83, diploid	McManus et al., 2014
Yeast S. cerevisiae	Ribosome profiling	GSE52119	6.83	50	GSY83, diploid	McManus et al., 2014