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. 2015 Mar 16;11(3):e1004127. doi: 10.1371/journal.pcbi.1004127

Table 2. Contingency table of composite classifier.

Predicted Medium/Phase/Strain
LEM LEB LEE LEO 9EM 9EB 9EO MEM MEB OEM OEE OEO O Total
Known Medium/Phase/Strain LEM 822 0 0 1 0 0 0 0 0 0 0 0 8 831
LEB 3 97 0 1 0 0 0 0 0 1 0 1 1 104
LEE 2 0 41 0 0 0 0 0 0 0 0 0 11 54
LEO 13 2 0 250 0 0 0 0 0 1 0 3 2 271
9EM 0 0 0 1 215 0 0 0 0 0 0 0 0 216
9EB 0 0 0 0 0 30 1 0 0 0 0 0 0 31
9EO 0 0 0 0 1 0 49 1 0 0 0 0 1 52
MEM 3 0 0 2 0 0 0 50 3 0 0 0 0 58
MEB 0 0 0 1 0 0 0 1 22 0 0 0 0 24
OEM 2 1 0 1 1 0 0 0 0 174 0 1 8 188
OEE 0 0 1 0 0 0 0 0 0 0 29 0 5 35
OEO 4 2 0 2 0 0 0 0 0 3 0 186 2 199
O 31 9 15 18 0 0 2 1 0 20 3 22 58 179
Total 880 111 57 277 217 30 52 53 25 199 32 213 96 2242

(1) LEM, LB medium + mid/late exponential phase + MG1655; (2) LEB, LB medium + mid/late exponential phase + BW25113; (3) LEE, LB medium + mid/late exponential phase + EMG2; (4) LEO, LB medium + mid/late exponential phase + strains other than MG1655, BW25133 and EMG2; (5) 9EM, M9 + mid/late exponential phase + MG1655; (6) 9EB, M9 + mid/late exponential phase + BW25113; (7) 9EO, M9 + mid/late exponential phase + strains other than MG1655, BW25133 and EMG2; (8) MEM, MOPS + mid/late exponential phase + MG1655; (9) MEB, MOPS + mid/late exponential phase + BW25113; (10) OEM, the other medium that is not LB, M9, or MOPS + mid/late exponential phase + MG1655; (11) OEE, the other medium that is not LB, M9, and MOPS + mid/late exponential + EMG2; (12) OEO, the other medium that is not LB, M9, or MOPS + mid/late exponential phase + the other strain that is not MG1655, BW25113, or EMG2; (12) O, the others that don’t belong to any of thirteen classes