Table 2.
DENV-3 strains used for phylogenetic analysis
| Strain | Code in tree | Geographic origin | Year of isolation | Accession number |
|---|---|---|---|---|
| BDH 02-01 | Bdesh 0201 | Bangladesh | 2002 | AY 496871 |
| BDH 02-07 | Bdesh 0207 | Bangladesh | 2002 | AY 496877 |
| 114 | Bdesh 00114 | Bangladesh | 2000 | AY656669 |
| 165 | Bdesh 00165 | Bangladesh | 2000 | AY656671 |
| 058 | Bdesh 00058 | Bangladesh | 2000 | AY656674 |
| Jacob | Bdesh 2001 | Bangladesh | 2001 | AY656673 |
| 68784 | Brazil 2000 | Brazil | 2000 | AY038605 |
| 80-2 | China 80 | China | 1980 | AF317645 |
| Cuba-21/02 | Cuba 02 | Cuba | 2002 | AY702031 |
| 29472 | Fiji 92 | Fiji | 1992 | L11422 |
| 1416 | India 84 | India | 1984 | L11424 |
| 228761 | Indon 73 | Indonesia | 1973 | L11425 |
| 1280 | Indon 78 | Indonesia | 1978 | L11426 |
| 85-159 | Indon 85 | Indonesia | 1985 | L11428 |
| 1300 | Malay 74 | Malaysia | 1974 | L11429 |
| 29586 | Malay 81 | Malaysia | 1981 | L11427 |
| LN 5547 | Malay 92 | Malaysia | 1992 | AF147457 |
| LN 1746 | Malay 93 | Malaysia | 1993 | AF147458 |
| LN 6083 | Malay 94 | Malaysia | 1994 | AF147460 |
| D3/H/IMTSSA-MART/2001/2012 | Martiniq 01 | Martinique | 2001 | AY099340 |
| MEX6097 | Mexico 95 | Mexico | 1995 | AY146763 |
| 1559 | Mozambiq 85 | Mozambique | 1985 | L11430 |
| 31985 KLA | Myan 98 | Myanmar | 1998 | AY145712 |
| DV3/Myanmar/0508aTw/ 2005 | Myan 05 | Myanmar | 2005 | DQ518666 |
| DV3/Mandalay.MYA/ H58/2006* | Myan 06 | Myanmar | 2006 | EU478409 |
| 24/94 | Nicaragu 94 | Nicaragua | 1994 | AY702033 |
| D3 PY/A59/03 | Paraguay 03 | Paraguay | 2003 | DQ 118885 |
| H 87 | Philip 56 | Philippines | 1956 | L 11423 |
| 168-AP-2 | Philip 83 | Philippines | 1983 | L11432 |
| PhMH-J1-97 | Philip 97 | Philippines | 1997 | AY 496879 |
| PR6 | PRico 63 | Puerto Rico | 1963 | L11433 |
| 1340 | PRico 77 | Puerto Rico | 1977 | L11434 |
| 1696 | Samoa 86 | Samoa | 1986 | L11435 |
| 1326 | SLanka 81 | Sri Lanka | 1981 | L11431 |
| 1594 | SLanka 85 | Sri Lanka | 1985 | L11436 |
| 260698 | SLanka 89 | Sri Lanka | 1989 | L11437 |
| 2783 | SLanka 91 | Sri Lanka | 1991 | L11438 |
| D3/Srilanka 9912aTw/1999 | SLanka 99 | Sri Lanka | 1999 | DQ 518679 |
| 2167 | Tahiti 89 | Tahiti | 1989 | L11619 |
| D3/Taiwan/813KH9408a/1994 | Taiwan 94 | Taiwan | 1994 | DQ 518667 |
| D3/Taiwan/701TN9811a/1998 | Taiwan 98 | Taiwan | 1998 | DQ 518662 |
| D3/Taiwan/807KH0509a/2005 | Taiwan 05 | Taiwan | 2005 | DQ 518659 |
| 5987 | Thai 62 | Thailand | 1962 | L11440 |
| CH3489D73-1 | Thai 73 | Thailand | 1973 | L11620 |
| D86-007 | Thai 86 | Thailand | 1986 | L11441 |
| MK315 | Thai 87 | Thailand | 1987 | L11442 |
| D88-303 | Thai 88 | Thailand | 1988 | AY145714 |
| D89-273 | Thai 89 | Thailand | 1989 | AY145715 |
| D91-393 | Thai 91 | Thailand | 1991 | AY145716 |
| D92-431 | Thai 92 | Thailand | 1992 | AY145719 |
| D92-423 | Thai 92 | Thailand | 1992 | AY145718 |
| D93-044 | Thai 93 | Thailand | 1993 | AY145720 |
| D94-283 | Thai 94 | Thailand | 1994 | AY145723 |
| D95-0400 | Thai 95 | Thailand | 1995 | AY145725 |
| D 96-313 | Thai 96 | Thailand | 1996 | AY145726 |
| D 97-0291 | Thai 97 | Thailand | 1997 | AY145730 |
| 00-27-1 Hu NIID | NIID 2000 | Thailand/Bangladesh | 2000 | AB111080 |
| LARD 5990 | Venezu 2000 | Venezuela | 2000 | AY146764 |
| LARD 6668 | Venezu 2001 | Venezuela | 2001 | AY146774 |
| D3/Vietnam/9609aTw/1996 | Vietnam 96 | Vietnam | 1996 | DQ518655 |
| D3/Vietnam/0409aTw/2004 | Vietnam 04 | Vietnam | 2004 | DQ518656 |
| D3/Vietnam/0507aTw/2005 | Vietnam 05 | Vietnam | 2005 | DQ518658 |
* New strain from Myanmar presented in this study