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. 2015 Mar 17;6:98. doi: 10.3389/fmicb.2015.00098

Table 1.

Statistics of the EST raw reads and assembly.

A. elongata Collozoum sp. S. streptacantha A. scolymantha Total
Total sequenced Raw reads 195,890 214,475 220,239 195,070 825,674
Cleaned reads 138,867 121,079 120,924 126,494 507,364
BP 5.0 × 107 4.2 × 107 4.2 × 107 4.1 × 107 1.7 × 108
Average length 362 337 348 369
Median length 365 324 338 378
After assembly Unigenes 14,210 42,784 25,590 42,251 124,835
BP 6.5 × 106 1.6 × 107 1.0 × 107 1.7 × 107 4.9 × 107
GC % 46.3 44.0 50.9 40.6
Coverage 8.6 3.3 5.2 3.2
Contigs No 3252 4888 3229 3243 14,612
Assembly size (BP) 2.8 × 106 3.4 × 106 2.8 × 106 2.9 × 106 1.2 × 107
%BP assembled 42.4 21.6 26.9 16.9
Average length 858 699 883 893
Median length 663 544 606 637
Annotations Blastn 410 153 1486 409 2458
Blastx 13,800 42,631 24,104 41,842 122,377
Unigenes annotated to GO 2798 4839 4662 6938 19,237
GO terms 2002 3027 3239 4318 6077
Unigenes annotated to KEGG 1303 1665 2264 2047 7279
KEGG pathways 98 101 105 111 123