Table 1. Oligonucleotide primer sequences used for cloning.
Cloning Step | Oligo name and sequence |
---|---|
Middle fragment PCR | (1F) 5′-CATGTGGAAGGCCAGTTTCG-3′ (4R) 5′-TACACCTCCAGCTCAGCGAT-3′ |
Nested 5′ RACE PCR Reaction 1 | Forward 5′ RACE outer from Ambion 5′-GCTGATGGCGATGAATGAACACTG-3′ (2R) 5′-GGTCAGCAGAGTCATCACGA-3′ |
Nested 5′ RACE PCR Reaction 2 | Forward 5′ RACE inner from Ambion 5′-CGCGGATCCGAACACTGCGTTTGCTGGCTTTGATG-3′ (1R) 5′-CGAAACTGGCCTTCCACATG-3′ |
Nested 3′ RACE PCR Reaction 1 | (3F) 5′-CACGATCTCCAGCACACTGT-3′ Reverse 3′ RACE outer from Ambion 5′-GCGAGCACAGAATTAATACGACT-3′ |
Nested 3′ RACE PCR Reaction 2 | (4F) 5′-ATCGCTGAGCTGGAGGTGTA-3′ Reverse 3′ RACE inner from Ambion 5′-CGCGGATCCGAATTAATACGACTCACTATAGG-3′ |
Splice overlap Extension PCR 5′ RACE + Middle fragment as template |
Forward 5′ RACE inner from Ambion 5′-CGCGGATCCGAACACTGCGTTTGCTGGCTTTGATG-3′ (4R) 5′-TACACCTCCAGCTCAGCGAT-3′ |
Splice overlap Extension PCR Middle fragment + 3′ RACE as template |
(1F) 5′-CATGTGGAAGGCCAGTTTCG-3′ Reverse 3′ RACE inner from Ambion 5′-CGCGGATCCGAATTAATACGACTCACTATAGG-3′ |