Table 1. Unigenes with a significant similarity to MATE in the Illumina/Solexa sequencing library of blueberry.
Unigene | Nr-ID | Gene length | TARAAPE rawreads | TBRAAPE rawreads | TARAAPE RPKM | TBRAAPE RPKM | log2(TB/TA) | Up/Down |
---|---|---|---|---|---|---|---|---|
Unigene27_All | NP_200058.1 | 1462 | 1573 | 853 | 71.9099 | 31.7664 | −1.1787 | Down |
Unigene 347_All | ADO22709.1 | 1496 | 873 | 3212 | 39.0023 | 116.8988 | 1.5836 | Up |
Unigene 1047_All | NP_194643.1 | 681 | 606 | 226 | 59.4748 | 18.0687 | −1.7188 | Down |
Unigene 2475_All | NP_194643.1 | 388 | 571 | 196 | 98.3584 | 27.5037 | −1.8384 | Down |
Unigene 2915_All | AAD46034.1 | 1878 | 95 | 1450 | 3.3809 | 42.0377 | 3.6362 | Up |
Unigene 4510_All | AAK53040.1 | 592 | 226 | 99 | 25.5149 | 9.105 | −1.4866 | Down |
Unigene 4079_All | ACC60274.1 | 2199 | 1677 | 1720 | 50.97 | 42.5862 | −0.2593 | Down |
Unigene 4546_All | ADO22709.1 | 510 | 58 | 149 | 7.6009 | 15.9068 | 1.0654 | Up |
Unigene 5999_All | NP_001057687.1 | 660 | 327 | 126 | 33.114 | 10.3942 | −1.6717 | Down |
Unigene 7401_All | XP_002890090.1 | 1819 | 773 | 399 | 28.4023 | 11.9428 | −1.2499 | Down |
Unigene 10025_All | NP_194034.1 | 212 | 138 | 61 | 43.5061 | 15.6661 | −1.4736 | Down |
Unigene 13574_All | AAK53040.1 | 1136 | 608 | 263 | 35.7711 | 12.605 | −1.5048 | Down |
Unigene 14339_All | ADO22709.1 | 389 | 48 | 122 | 8.2471 | 17.0756 | 1.05 | Up |
Unigene 16852_All | NP_177270.1 | 910 | 1809 | 2027 | 132.8631 | 121.277 | −0.1316 | Down |
Unigene 17196_All | NP_194294.2 | 1780 | 280 | 1267 | 10.5134 | 38.7545 | 1.8821 | Up |
Unigene 17373_All | NP_001043893.1 | 227 | 230 | 308 | 67.7188 | 73.8739 | 0.1255 | Up |
Unigene 19867_All | NP_200058.1 | 587 | 69 | 73 | 7.8563 | 6.71 | −0.2145 | Down |
Unigene 20486_All | NP_001043893.1 | 227 | 41 | 119 | 12.0716 | 28.5422 | 1.2415 | Up |
Unigene 23136_All | XP_002278724.1 | 372 | 25 | 7 | 4.4916 | 1.0245 | −2.1323 | Down |
Unigene 25244_All | NP_194643.1 | 270 | 80 | 18 | 19.8031 | 3.6297 | −2.4478 | Down |
Unigene 28730_All | AAK53040.1 | 368 | 0 | 41 | 0 | 6.066 | 12.5665 | Up |
Unigene 28970_All | NP_566730.1 | 338 | 1 | 40 | 0.1977 | 6.4433 | 5.0264 | Up |
Unigene 29667_All | BAF47751.1 | 437 | 0 | 57 | 0 | 7.1017 | 12.7939 | Up |
Unigene 29812_All | XP_002278724.1 | 540 | 4 | 51 | 0.4951 | 5.1421 | 3.3766 | Up |
Unigene 30026_All | NP_189291.1 | 1507 | 38 | 743 | 1.6853 | 12.3922 | 2.8784 | Up |
Unigene 30398_All | NP_187012.2 | 1689 | 1 | 959 | 0.0396 | 30.914 | 9.6085 | Up |
Unigene 31039_All | BAF47752.1 | 201 | 9 | 150 | 2.9926 | 40.6314 | 3.7631 | Up |
Unigene 31994_All | XP_002278724.1 | 227 | 2 | 36 | 0.5889 | 8.6346 | 3.874 | Up |
Unigene 32737_All | AAK53040.1 | 261 | 1 | 0.2561 | 19 | 3.9635 | 3.952 | Up |
Unigene 33021_All | ADO22711.1 | 282 | 18 | 28 | 0.5889 | 8.6346 | 3.874 | Up |
Unigene 33638_All | ABA96342.2 | 342 | 0 | 19 | 0 | 3.0248 | 11.5626 | Up |
Unigene 34286_All | NP_187012.2 | 642 | 38 | 3144 | 3.956 | 266.6328 | 6.0747 | Up |
Unigene 34357_All | BAF47752.1 | 786 | 34 | 2005 | 2.8911 | 138.8858 | 5.5861 | Up |
Note:TARAAPE and TBRAAPE rawreads represent the gene abundance of the sarcocarp and exocarp, respectively, TARAAPE RPKM (TA) and TBRAAPE RPKM (TB) is used for the expression level of sarcocarp and exocarp, respectively.