Table 1.
Characteristic | Grass (maize) phasiRNA* | Mammalian piRNA† | ||
Organ | Anther | Testis | ||
Developmental stage | Premeiotic | Meiotic | Prepachytene | Pachytene |
Peak timing | 0.4-mm anther | 2.0-mm anther | 12.5 dpp | 17.5 dpp |
Size | 21 nt | 24 nt | 26–27 nt | 29–30 nt |
AGO partner | AGO5c‡ | AGO18b‡ | MILI, MIWI2 | MIWI |
Master regulator | miR2118 | miR2275 | Unknown | A-myb |
Number of loci | 463 | 176 | ∼900 | ∼100 |
Abundance | Very high | |||
Distribution | Present on all chromosomes; most loci are clustered | |||
Precursor | Noncoding, Pol II transcripts | |||
Single copy? | Nearly all | |||
Repeat associated? | Few | |||
Impacts on fertility | Misregulated in sterile mutants; biogenesis defects can cause sterility | |||
Targeting | The majority lack complementarity to TEs or other loci | |||
Function(s) | Unknown | Mainly unknown; a subset silence TEs |