Skip to main content
. 2015 Mar 17;10(3):e0120604. doi: 10.1371/journal.pone.0120604

Table 2. Candidate genes as detected for root hair surface response to scarce local phosphate supply by genome-wide association study.

Chr Pos[bp] p-value Gene Position Annotation
5 20820955 1.89E-07 At5G51230 upstream CYR1, cytokinin resistant
1 11670614 1.92E-07 At1G32360 upstream Zinc finger (CCCH-type) family protein
1 11670614 1.92E-07 At1G32350 upstream AOX1D, alternative oxidase 1D
1 22986142 7.24E-06 At1G62200 upstream PTR6, peptide transporter
2 10855824 1.41E-05 At2G25500 upstream nosine triphosphate pyrophosphatase family protein
5 18375271 1.60E-05 At5G45340 upstream CYP707A3
1 21316400 1.91E-05 At1G57560 upstream MYB50, transcription factor
1 21316982 2.07E-05 At1G57560 in gene MYB50, transcription factor
2 7900874 2.30E-05 At2G18160 upstream ATBZIP2, transcription factor
3 4768402 2.65E-05 At3G14300 in gene ATPME26
3 10174453 3.53E-05 At3G27480 in gene Cysteine/Histidine-rich C1 domain family protein
1 29355538 3.54E-05 At1G78070 in gene Transducin/WD40 repeat-like superfamily protein
3 18987992 3.60E-05 At3G51120 in gene DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding
5 2987972 3.65E-05 At5G09640 upstream SNG2
5 13590082 4.93E-05 At5G35370 in gene S-locus lectin protein kinase family protein
1 26328682 5.02E-05 At1G69910 upstream Protein kinase superfamily protein
1 8740591 5.57E-05 At1G24706 upstream THO2
3 8953457 6.11E-05 At3G24540 in gene PERK3
2 16738390 6.43E-05 At2G40090 in gene ATH9
3 15250210 7.48E-05 At3G43302 in gene gypsy-like retrotransposon family
1 21315507 7.64E-05 At1G57560 upstream MYB50
1 7085727 8.56E-05 At1G20440 in gene COR47
3 12189492 8.91E-05 At3G30620 in gene gypsy-like retrotransposon family (Athila)