Table 4.
Estimated relationships | Inbreeding coefficients | |||||
---|---|---|---|---|---|---|
First degree | Second degree | Less-related | Depth1 | Depth2 | Depth4 | |
A ped ~ G SNP5+ | 0.450a,b | 0.372a,b | 0.511a,b | 0.395a,b | 0.595a,b | 0.721a,b |
A ped ~ G WGS5+ | 0.487a,b | 0.361a,b | 0.512a,b | 0.392a,b | 0.579a,b | 0.710a,b |
G WGS5+ ~ G SNP5+ | 0.973a,b | 0.982a,b | 0.979a,b | 0.979a,b | 0.985a,b | 0.985a,b |
A ped ~ G SNP1+ | 0.335a,b | 0.351a,b | 0.516a,b | 0.391a,b | 0.601a,b | 0.723a,b |
A ped ~ G WGS1+ | 0.212b | 0.286a,b | 0.514a,b | 0.360a,b | 0.570a,b | 0.689a,b |
G WGS1+ ~ G SNP1+ | 0.948a,b | 0.967a,b | 0.966a,b | 0.933a,b | 0.936a,b | 0.946a,b |
A ped ~ G SNP1_5 | −0.162b | 0.045b | 0.374a,b | 0.122b | 0.448a,b | 0.501a,b |
A ped ~ G WGS1_5 | −0.170b | 0.022b | 0.351a,b | 0.035b | 0.142b | 0.198b |
G WGS1_5 ~ G SNP1_5 | 0.950 a,b | 0.857a,b | 0.676a,b | 0.515a,b | 0.487a,b | 0.537a,b |
G SNP1+ ~ G SNP5+ | 0.978a,b | 0.995a | 0.999a | 0.999a | 0.999a | 0.999a |
G WGS1+ ~ G WGS5+ | 0.888a,b | 0.972a,b | 0.989a,b | 0.965a,b | 0.969a,b | 0.978a,b |
G SNP5+ ~ G SNP1_5 | 0.567a,b | 0.587a,b | 0.555a,b | 0.446a,b | 0.467a,b | 0.588a,b |
G WGS5+ ~ G WGS1_5 | 0.503a,b | 0.647a,b | 0.600a,b | 0.263a,b | 0.185b | 0.315a,b |
G SNP1+ ~ G SNP1_5 | 0.725a,b | 0.661a,b | 0.593a,b | 0.488a,b | 0.494a,b | 0.611a,b |
G WGS1+ ~ G WGS1_5 | 0.844a,b | 0.808a,b | 0.714a,b | 0.507a,b | 0.423a,b | 0.505a,b |
a,bwhere ameans significantly different from 0 and bsignificantly different from 1 (P-value ≤0.05).