Table 1.
Primer | Sequence (5′ – 3′) | Position | PCR product (bp) | |
---|---|---|---|---|
G-typing (VP7) first amplification | ||||
VP7-F | ATG TAT GGT ATT GAA TAT ACC AC | nt 51-71 | 881 | |
VP7-R | AAC TTG CCA CCA TTT TTT CC | nt 914-932 | ||
G-typing (VP7) second amplification | ||||
G1 | aBT1 | CAA GTA CTC AAA TCA ATG ATG G | nt 314-335 | 618 |
G2 | aCT2 | CAA TGA TAT TAA CAC ATT TTC TGT G | nt 411-435 | 521 |
G3 | mG3 | ACG AAC TCA ACA CGA GAG G | nt 250-269 | 682 |
G4 | aDT4 | CGT TTC TGG TGA GGA GTT G | nt 480-498 | 452 |
G8 | aAT8 | GTC ACA CCA TTT GTA AAT TCG | nt 178-198 | 754 |
G9 | mG9 | CTT GAT GTG ACT AYA AAT AC | nt 757-776 | 179 |
P-typing (VP4) first amplification | ||||
VP4-F | TAT GCT CCA GTN AAT TGG | nt 132-149 | 663 | |
VP4-R | ATT GCA TTT CTT TCC ATA ATG | nt 775-795 | ||
P-typing (VP4) second amplification | ||||
P[4] | 2T-1 | CTA TTG TTA GAG GTT AGA GTC | nt 474–494 | 362 |
P[6] | 3T-1 | TGT TGA TTA GTT GGA TTC AA | nt 259–278 | 146 |
P[8] | 1T-1 | TCT ACT TGG ATA ACG TGC | nt 339 –356 | 224 |
P[9] | 4T-1 | TGA GAC ATG CAA TTG GAC | nt 385–402 | 270 |
P[10] | 5T-1 | ATC ATA GTT AGT AGT CGG | nt 575–594 | 462 |
References: [35].