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. 2015 Mar 19;10(3):e0120697. doi: 10.1371/journal.pone.0120697

Table 2. Detail of PCR primers used for Restriction fragment length polymorphism.

Gene SNP name alleles Forward/Reverse primer sequence (5’-3’) PCR product size Restriction enzyme
TLR1 R80T G>C F-5’ TTCCTAAAGACCTATCCCAG3’ 341 bp Hinf1
R-5’GAGCAATTGGCAGCACACTAG3’
TLR2 R753Q G>A F-5’ CATAAGCGGGACTTCATTCCTGCAA3’ 372 bp Pst1
R-5’GATCCCAACTAGACAAGACTGGTCT3’
TLR3 S258G A>G F-5’GGGTCCCAGCCTTACAGAGA3’ 341 bp BsuRI
R-5’CAATCTTGGGGAGTGAGGCA3’
TLR5 R392X C>T F-5’GGTAGCCTACATTGATTTGC3’ 346 bp Dde1
F-5’GGATTCTCTGAAGGGGTTTAT3’
TLR5 N592S A>G F-5’GACTAAGCCTCAACTCCAACA3’ 314 bp Mun1
R-5’GACTTCCTCTTCATCACAACC3;
TLR6 S249P T>C F-5’CTAGTTTATTCGCTATCCAAG3’ 312 bp Eco47I
R-5’TTGTCAATGCTTTCAATGTCG3’

PCR = Polymerase chain reaction, TLR = Toll like receptor, bp = Base pairs, SNP = Single nucleotide polymorphism.