Table 3.
Top 20 maternal SNPs from the genomewide association study
| Chr. | SNP | Map Coordinate* | Minor Allele | MAF | P-value | OR | Gene |
|---|---|---|---|---|---|---|---|
| 3 | rs17053026 | 53418798 | T | 0.05 | 1.0E-06 | 0.44 | DCP1A |
| 12 | rs12830013 | 16677532 | T | 0.21 | 1.1E-06 | 1.52 | LMO3 |
| 4 | rs17001970 | 77370038 | T | 0.08 | 5.6E-06 | 1.80 | SHROOM3 |
| 9 | rs501631 | 3943125 | T | 0.48 | 5.9E-06 | 1.37 | GLIS3 |
| 8 | rs6989497 | 27612891 | A | 0.12 | 6.2E-06 | 1.60 | CCDC25 |
| 8 | rs6987111 | 27600450 | A | 0.12 | 8.0E-06 | 1.58 | CCDC25 |
| 8 | rs7823365 | 27601594 | A | 0.12 | 1.0E-05 | 1.57 | CCDC25 |
| 2 | rs12995518 | 50880025 | T | 0.36 | 1.1E-05 | 1.36 | NRXN1 |
| 5 | rs2047075 | 4109621 | C | 0.43 | 1.4E-05 | 1.35 | IRX1 |
| 17 | rs7211542 | 4374569 | C | 0.13 | 2.1E-05 | 1.51 | SPNS3 |
| 8 | rs6989156 | 27604550 | C | 0.13 | 2.2E-05 | 1.53 | CCDC25 |
| 17 | rs17746268 | 63315317 | A | 0.08 | 2.6E-05 | 1.65 | RGS9 |
| 4 | rs6858750 | 56090836 | A | 0.04 | 2.7E-05 | 0.46 | LOC100128865 |
| 22 | rs737627 | 45259574 | A | 0.03 | 3.0E-05 | 2.44 | PHF21B |
| 10 | rs6480306 | 69935235 | T | 0.02 | 3.3E-05 | 3.14 | MYPN |
| 8 | rs9314355 | 27699168 | T | 0.11 | 3.3E-05 | 1.56 | PBK |
| 1 | rs12066169 | 19070568 | T | 0.01 | 3.3E-05 | 5.22 | PAX7 |
| 12 | rs11046680 | 23042553 | A | 0.05 | 3.7E-05 | 1.95 | ETNK1 |
| 10 | rs17531466 | 36350381 | T | 0.06 | 4.0E-05 | 1.86 | FZD8 |
| 11 | rs1025888 | 99747329 | C | 0.48 | 4.1E-05 | 1.32 | CNTN5 |
Genome build GRCh37