Table 4.
Top 20 neonatal SNPs obtained from the genomewide association study
Chr. | SNP | Map Coordinate * | Minor Allele | MAF | P-value | OR | Gene |
---|---|---|---|---|---|---|---|
6 | rs17527054 | 23925921 | G | 0.08 | 2.7E-12 | 0.39 | LOC100128365 |
6 | rs3777722 | 167352104 | A | 0.21 | 1.4E-10 | 0.57 | RNASET2 |
1 | rs480745 | 83269970 | A | 0.09 | 8.0E-08 | 0.51 | LPHN2 |
6 | rs2794256 | 119943401 | A | 0.27 | 4.8E-07 | 1.48 | MAN1A1 |
6 | rs4429972 | 130395304 | T | 0.03 | 8.3E-07 | 0.33 | L3MBTL3 |
2 | rs11892526 | 191255883 | C | 0.23 | 9.7E-07 | 0.65 | INPP1 |
13 | rs563538 | 37433721 | T | 0.04 | 1.1E-06 | 2.47 | SMAD9 |
7 | rs17553718 | 123731276 | G | 0.31 | 1.8E-06 | 0.69 | TMEM229A |
6 | rs560131 | 7047411 | G | 0.41 | 2.3E-06 | 1.41 | RREB1 |
4 | rs17703512 | 168137719 | C | 0.28 | 2.5E-06 | 0.69 | SPOCK3 |
8 | rs16877149 | 109090197 | A | 0.21 | 2.8E-06 | 0.67 | RSPO2 |
11 | rs10892761 | 121497884 | C | 0.36 | 2.8E-06 | 0.71 | SORL1 |
6 | rs6927568 | 114025900 | A | 0.03 | 4.4E-06 | 0.35 | LOC100652953 |
8 | rs11780793 | 109154752 | T | 0.19 | 5.7E-06 | 0.67 | RSPO2 |
6 | rs3863225 | 7032317 | A | 0.41 | 5.9E-06 | 1.38 | RREB1 |
2 | rs184270 | 163710934 | T | 0.03 | 6.2E-06 | 2.49 | KCNH7 |
4 | rs13130860 | 6530193 | G | 0.27 | 6.2E-06 | 0.70 | LINC00487 |
2 | rs1651151 | 108083239 | G | 0.30 | 6.4E-06 | 0.72 | NOL10 |
2 | rs266174 | 108050854 | A | 0.30 | 6.5E-06 | 0.72 | NOL10 |
2 | rs266236 | 108078636 | G | 0.30 | 6.5E-06 | 0.72 | NOL10 |
Genome build GRCh37