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. Author manuscript; available in PMC: 2016 Mar 1.
Published in final edited form as: Genet Epidemiol. 2015 Feb 12;39(3):173–184. doi: 10.1002/gepi.21889

Table II.

Sample output of the BNPP. For one of the 100 1000 SNP datasets, the most probable model up to the first model not including a causal SNP is shown. The posterior probabilities were computed using the BNPP and the lower prior probabilities in Table 1.

Causal Model Posterior Probability
S6 1.0
S12 1.0
S13 1.0
S6, S12 1.0
S6, S13 1.0
S12, S13 1.0
S6, S12, S13 1.0
S6, S8 0.992
S6, S8, S13 0.980
S6, S8, S12 0.923
S6, S8, S12, S13 0.403
S6, S11 0.0004
S5, S6 0.0003
S6, S8, S31 0.0003