Table V.
Using the BNP and the low and high probabilities shown in Table 1, the posterior probabilities of the 10 most probable association patterns learned from the LOAD dataset are shown. The ranking in the far right column is according to the likelihood computed using the BDeu score.
Model | Posterior Probability | Previous Load Assoc. | Rank of Lower Ranking SNP | |
---|---|---|---|---|
1 | APOE | (1.0, 1.0) | yes | 1 |
2 | rs41377151 (APOC1) | (1.0, 1.0) | yes | 2 |
3 | rs6784615 (NISCH) | (0.071, 0.434) | yes | 3 |
4 | APOE, rs6784615 (NISCH) | (0.041, 0.349) | yes | 3 |
5 | rs41377151 (APOC1), rs7355646 | (0.035, 0.291) | no | 1000 |
6 | rs10824310 (PRKG1) | (0.034, 0.259) | yes | 4 |
7 | rs4356530 | (0.024, 0.199) | yes | 5 |
8 | rs41377151 (APOC1), rs17126808 (PSD3) | (0.018, 0.163) | yes | 18 |
9 | rs41377151 (APOC1), rs16842422 | (0.017, 0.152) | yes | 26 |
10 | rs41377151 (APOC1), rs383407 | (0.015, 0.139) | no | 56 |