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Transposable element methylation of PA64S(S) and PA64S (F) based on 10 kb tiled genome windows
| Type | PA64S(S) | PA64S(F) | ||
|---|---|---|---|---|
| reads | % | reads | % | |
| LTR/Copia | 521,175 | 5.62 | 533,088 | 5.79 |
| DNA/En-Spm | 658,162 | 7.1 | 676,617 | 7.35 |
| LTR/Gypsy | 4,045,323 | 43.63 | 4,293,192 | 46.61 |
| LTR | 55,692 | 0.6 | 55,798 | 0.61 |
| LINE/L1 | 174,518 | 1.88 | 171,516 | 1.86 |
| SINE | 167,785 | 1.81 | 154,945 | 1.68 |
