Table 5.

P-values of the Hotelling’s t-test comparing the prediction reliabilities obtained with the individual SNPs and Haploblocks approaches using Bayesian mixture model

		Haploblocks and
		non-blocked SNPs				Haploblocks only
D ′		Prot.	Fert.	Mast.		Prot.	Fert.	Mast.
0.25		0.002	0.193	0.292		0.000	0.279	0.270
0.35		0.006	0.076	0.355		0.000	0.028	0.236
0.45		0.010	0.054	0.144		0.003	0.007	0.402
0.55		0.008	0.045	0.585		0.000	0.082	0.711
0.65		0.004	0.081	0.652		0.001	0.086	0.961
0.75		0.052	0.009	0.236		0.048	0.022	0.163