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. 2015 Mar 20;10(3):e0121574. doi: 10.1371/journal.pone.0121574

Table 1. List of primer sequences used in this study.

Gene Primer set Annealing temperature (°C) Amplicon size (bp) GenBank accession number
HDAC1 F: GGAAATCTATCGCCCTCACAR: AAACACCGGACAGTCCTCAC 60 157 XM_003356305.2
HDAC2 F: AACCTGCTGCTTGGAGAAAAR: ACCATCAGGATGCAAAGCTC 60 201 XM_001925318.3
HDAC3 F: CAACCAGGTGGTGGACTTCTR: GCAGAGGGATGTTGAAGCTC 60 152 NM_001243827.1
HDAC4 F: GGTCCTCGCCTACCTTATCCR: GACGCCTGGTAGTTCCTCAG 60 189 XM_003359701.2
HDAC5 F: AGATGCACTCCTCCAGTGCTR: GGATGATGGCAAATCCATTC 60 102 XR_135351.1
HDAC6 F: ATGGACGGGTATTGCATGTTR: GCGGTGGATGGAGAAATAGA 60 168 XM_003360315.2
HDAC7 F: CGTCCCCTACAGAACTCTCGR: TCAGGTTGGGCTCAGAGACT 60 146 XM_003355640.2
HDAC8 F: GGTGACGTGTCTGATGTTGGR: AGCTCCCAGCTGTAAGACCA 60 165 XM_003360365.2 165
HDAC9 F: AACTGAAGCAACCAGGCAGTR: CCCAACTTGTCCCAGTGAGT 60 149 XM_003122063.2
HDAC10 F: TCCATCCGAGTACCTTCCACR: GGCTGCTATGGCCACACTAT 60 179 XM_003362070.1
HDAC11 F: GACAAGCGCGTGTACATCATR: AGGTTCCTCTCCACCTTCGT 60 143 XM_003483230.1
DNMT1 F: GCGGGACCTACCAAACATR: TTCCACGCAGGAGCAGAC 60 133 DQ060156
DNMT3a F: CTGAGAAGCCCAAGGTCAAGR: CAGCAGATGGTGCAGTAGGA 60 238 NM_001097437
CD40 F: TGAGAGCCCTGGTGGTTATCR: CTCTCTTTGCCATCCTCCTG 60 235 NM_214194.1
CD80 F: TCAGACACCCAGGTACACCAR: GACACATGGCTTCTGCTTGA 60 189 NM_214087.1
CD86 F: TTTGGCAGGACCAGGATAACR: GCCCTTGTCCTTGATTTGAA 60 152 NM_214222.1
TLR4 F: ATCATCCAGGAAGGTTTCCACR: TGTCCTCCCACTCCAGGTAG 58 235 NM_001097444.1
MD2 F: TGCAATTCCTCTGATGCAAGR: CCACCATATTCTCGGCAAAT 60 226 NM_001104956.1
NF-κB1 F: TGGGAAAGTCACAGAAACCAR: CCAGCAGCATCTTCACATCT 60 187 NM_001048232.1
TBP F: GATGGACGTTCGGTTTAGGR: AGCAGCACAGTACGAGCAA 60 124 DQ845178.1
IFN-γ F:AGCTCCCAGAAACTGAACGAR:AGGGTTCAAAGCATGAATGG 60 225 NM_213948.1
TNF-α F: CCACCAACGTTTTCCTCACTR: CCAAAATAGACCTGCCCAGA 60 247 NM_214022.1
IL-1ß F: GTACATGGTTGCTGCCTGAAR: CTAGTGTGCCATGGTTTCCA 59 137 NM_001005149.1
IL-8 F:TAGGACCAGAGCCAGGAAGAR:CAGTGGGGTCCACTCTCAAT 60 174 NM_213997.1
HPRT1 F: AACCTTGCTTTCCTTGGTCAR: TCAAGGGCATAGCCTACCAC 60 150 NM_001032376.2

F: Forward primer; R: Reverse primer; bp: base pair.