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. 2015 Mar 20;10(3):e0120393. doi: 10.1371/journal.pone.0120393

Table 2. Characteristics of the microsatellite loci, including the type of fluorescent dye (Dye) and the mixing ratio of fluorescent and non-fluorescent forward primers (Fl: Non-fl), the observed number of alleles (N A), observed (H O) and expected (H E) heterozygosity, probability of exclusion when one parent is known (P EX), and estimated null allele frequency by locus for the 60 individual Castanea crenata trees at the Field Research Center, Tohoku University, Miyagi, Japan.

Locus Dye Fl : Non-fl NA HO HE PEX Null allele frequency Reference
CsCAT2 VIC 2 : 8 6 0.450 0.415 0.247 − 0.0571 Marinoni et al. [65]
CsCAT5 PET 10 : 0 13 0.717 0.681 0.459 + 0.0334 Marinoni et al. [65]
CsCAT14 6-FAM 1 : 9 6 0.733 0.669 0.415 − 0.0502 Marinoni et al. [65]
EMCs2 PET 1 : 9 3 0.617 0.588 0.031 − 0.0223 Buck et al. [66]
EMCs17 PET 2 : 8 2 0.383 0.333 0.138 − 0.0750 Buck et al. [66]
KT001b 6-FAM 2 : 8 12 0.683 0.675 0.430 − 0.0061 Yamamoto et al. [67]
KT004a VIC 4 : 6 12 0.750 0.790 0.594 + 0.0254 Yamamoto et al. [67]
KT005a NED 8 : 2 13 0.917 0.859 0.708 − 0.0369 Yamamoto et al. [67]
KT020a NED 2 : 8 5 0.633 0.535 0.324 − 0.1258 Yamamoto et al. [67]
KT024a 6-FAM 1 : 9 4 0.317 0.296 0.157 − 0.0382 Yamamoto et al. [67]
KT030a NED 3 : 7 7 0.867 0.757 0.537 − 0.0726 T. Yamamoto, pers. comm.
Mean 7.5 0.642 0.600 0.997*

These parameters were calculated using CERVUS 3.0.3 [54].

*Overall combined exclusion probability