Table 1.

CD43 Polymorphism Frequencies in Control and Tuberculosis Groups

SNP,* Group	Subjects with Genotype (n [%])			Genotypic Comparison		HWE P Value
	00	01	11	χ2	P Value
rs11859842 T/C
Control	364 (0.953)	18 (0.047)	0 (0)			0.637
All TB†	347 (0.934)	21 (0.061)	2 (0.006)	2.883	0.237
rs11150564 G/A
Control	218 (0.578)	137 (0.363)	22 (0.058)			0.938
All TB	196 (0.578)	116 (0.342)	27 (0.080)	1.410	0.494
rs4788172 G/A
Control	126 (0.335)	187 (0.497)	63 (0.168)			0.650
All TB	122 (0.378)	123 (0.381)	78 (0.241)	10.92	0.004
rs3764275 C/A
Control	163 (0.429)	176 (0.463)	41 (0.108)			0.523
All TB	161 (0.491)	126 (0.384)	41 (0.125)	4.496	0.106
rs11574552 T/C
Control	171 (0.451)	165 (0.476)	43 (0.113)			0.738
All TB	143 (0.427)	133 (0.397)	59 (0.176)	5.753	0.056
rs3764276 T/C
Control	381 (0.997)	1 (0.003)	0 (0)			0.980
All TB	348 (0.997)	1 (0.003)	0 (0)	0.004	0.949
rs2071420 A/G
Control	179 (0.469)	165 (0.432)	38 (0.099)			0.998
All TB	154 (0.467)	132 (0.400)	44 (0.133)	2.197	0.333
rs1050881 C/T
Control	161 (0.429)	172 (0.459)	42 (0.112)			0.698
All TB	146 (0.465)	119 (0.379)	49 (0.156)	5.567	0.062
rs17842268 T/C
Control	165 (0.440)	176 (0.469)	34 (0.091)			0.181
All TB	161 (0.407)	127 (0.371)	54 (0.158)	11.02	0.004
rs12596308 T/C
Control	156 (0.413)	180 (0.476)	42 (0.111)			0.354
All TB	137 (0.408)	132 (0.393)	67 (0.199)	11.92	0.003
rs12599318 G/A
Control	361 (0.953)	18 (0.047)	0 (0)			0.636
All TB	315 (0.938)	19 (0.057)	2 (0.057)	2.581	0.275

Definition of abbreviations: HWE, Hardy Weinberg equilibrium P value in control subjects; SNP, single-nucteotide polymorphism; TB, tuberculosis.

^*SNPs are listed by reference SNP ID in genomic order on chromosome 16. 0, common allele; 1, minor allele.

^†All TB includes pulmonary tuberculosis and tuberculous meningitis cases from the discovery cohort.